ggKbase home page

L3_063_040G1_scaffold_487

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_487_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..64)
DNA (63bp) protein (21aa)
Transcriptional activator protein nhaR n=1 Tax=Escherichia coli UMEA 3203-1 RepID=T9BQE1_ECOLX
nhaR; transcriptional regulator
Transcriptional activator NhaR {ECO:0000313|EMBL:EHC55372.1}; TaxID=913072 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Give str. S5-487.;"
L3_063_040G1_scaffold_487_2
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126..1304)
DNA (1179bp) protein (393aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZT0_ESCHE
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
nhaA; pH-dependent sodium/proton antiporter
L3_063_040G1_scaffold_487_3
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1545..2678)
DNA (1134bp) protein (378aa)
Chaperone protein DnaJ n=3 Tax=Escherichia hermannii RepID=H5UZS9_ESCHE
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
molecular chaperone DnaJ
L3_063_040G1_scaffold_487_4
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2828..4744)
DNA (1917bp) protein (639aa)
Chaperone protein DnaK n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZS8_ESCHE
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
dnaK; molecular chaperone DnaK
L3_063_040G1_scaffold_487_5
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5034..5600
DNA (567bp) protein (189aa)
Putative uncharacterized protein yaaH n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZS7_ESCHE
Enterobacter aerogenes strain DDE1 c8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU32992.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
GPR1/FUN34/yaaH family protein
L3_063_040G1_scaffold_487_6
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5689..6993)
DNA (1305bp) protein (435aa)
Proline/betaine transporter n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZS2_ESCHE
Proline/betaine transporter {ECO:0000313|EMBL:GAB51230.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
MFS transporter
L3_063_040G1_scaffold_487_7
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7120..7707)
DNA (588bp) protein (196aa)
Molybdopterin adenylyltransferase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZS1_ESCHE
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:GAB51229.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
mog; molybdenum cofactor biosynthesis protein MogA
L3_063_040G1_scaffold_487_8
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7830..8783)
DNA (954bp) protein (318aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
talB; transaldolase B (EC:2.2.1.2)
Transaldolase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZS0_ESCHE
L3_063_040G1_scaffold_487_9
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8987..10420
DNA (1434bp) protein (478aa)
Putative AGCS family transporter YaaJ n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZR9_ESCHE
Putative AGCS family transporter YaaJ {ECO:0000313|EMBL:GAB51227.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
amino acid carrier protein
L3_063_040G1_scaffold_487_10
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10499..11272
DNA (774bp) protein (258aa)
UPF0246 protein YaaA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZR8_ESCHE
UPF0246 protein SR38_12635 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
yaaA; hypothetical protein
L3_063_040G1_scaffold_487_11
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11326..12612)
DNA (1287bp) protein (429aa)
Threonine synthase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZR7_ESCHE
Enterobacter aerogenes strain DDE1 c8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU33000.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
threonine synthase
L3_063_040G1_scaffold_487_12
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12616..13545)
DNA (930bp) protein (310aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZR6_ESCHE
L3_063_040G1_scaffold_487_13
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13547..16009)
DNA (2463bp) protein (821aa)
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I (EC:1.1.1.3 2.7.2.4)
Aspartokinase/homoserine dehydrogenase ThrA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZR5_ESCHE
Aspartokinase/homoserine dehydrogenase ThrA {ECO:0000313|EMBL:GAB51223.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L3_063_040G1_scaffold_487_14
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16365..17051)
DNA (687bp) protein (229aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
Putative tRNA/rRNA methyltransferase LasT n=2 Tax=Bacteria RepID=H5UZR4_ESCHE
RNA methyltransferase
Displaying 14 items

View Taxonomy