ggKbase home page

L3_063_040G1_scaffold_492

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_492_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..238
DNA (237bp) protein (79aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1348563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Namur str. 05-2929.;"
DNA-directed RNA polymerase subunit omega n=2 Tax=Enterobacteriaceae RepID=R9VRZ0_9ENTR
L3_063_040G1_scaffold_492_2
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

257..2389
DNA (2133bp) protein (711aa)
Bifunctional (P)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VMJ5_9ENTR
bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
Bifunctional (P)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase {ECO:0000313|EMBL:AGN86314.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_492_3
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2521..3210
DNA (690bp) protein (230aa)
tRNA guanosine-2'-O-methyltransferase {ECO:0000313|EMBL:KDE36634.1}; EC=2.1.1.34 {ECO:0000313|EMBL:KDE36634.1};; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
spoU; tRNA guanosine-2'-O-methyltransferase (EC:2.1.1.34)
tRNA guanosine-2'-O-methyltransferase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QMY5_9ENTR
L3_063_040G1_scaffold_492_4
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3216..5297
DNA (2082bp) protein (694aa)
ATP-dependent DNA helicase RecG n=1 Tax=Enterobacter sp. R4-368 RepID=R9VPW2_9ENTR
ATP-dependent DNA helicase RecG
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:AGN86316.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_492_5
Dickeya chrysanthemi, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5298..5975)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PCC21 RepID=J7KYH6_PECCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGT99651.1}; TaxID=556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya chrysanthemi (Pectobacterium chrysanthemi) (Erwinia; chrysanthemi).;"
L3_063_040G1_scaffold_492_6
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6202..7587
DNA (1386bp) protein (462aa)
Xanthine permease n=1 Tax=Enterobacter sp. R4-368 RepID=R9VNI1_9ENTR
xanthine permease
Xanthine permease {ECO:0000313|EMBL:AGN86317.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_492_7
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7708..9450
DNA (1743bp) protein (581aa)
AsmA family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2J086_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDE36637.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
hypothetical protein
L3_063_040G1_scaffold_492_8
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9612..10298)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IXF8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EJI92237.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
hypothetical protein
L3_063_040G1_scaffold_492_9
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10295..11212)
DNA (918bp) protein (306aa)
Fructokinase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QKS1_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS43514.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
putative sugar kinase/transcriptional regulator. ATPase domain
L3_063_040G1_scaffold_492_10
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11261..12121)
DNA (861bp) protein (287aa)
Ketose-bisphosphate aldolases family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1R1Z6_9ENTR
Ketose-bisphosphate aldolases family protein {ECO:0000313|EMBL:EJI92106.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
hypothetical protein
L3_063_040G1_scaffold_492_11
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12203..13054)
DNA (852bp) protein (284aa)
Fructose-bisphosphate aldolase class-II family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YVJ2_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS42921.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
aldolase
L3_063_040G1_scaffold_492_12
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13066..14157)
DNA (1092bp) protein (364aa)
PTS system, Fru family, IIC component domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QJP2_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS43408.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
PTS fructose transporter subunit IIC
L3_063_040G1_scaffold_492_13
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14176..14490)
DNA (315bp) protein (105aa)
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS41987.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KIS41987.1};; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
Fructose-like phosphotransferase enzyme IIB component 2 n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QLH2_9ENTR
PTS fructose transporter subunit IIB
L3_063_040G1_scaffold_492_14
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14510..14980)
DNA (471bp) protein (157aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=6 Tax=Enterobacteriaceae RepID=D4BIT8_9ENTR
FrvA
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EFE06332.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
L3_063_040G1_scaffold_492_15
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15006..16559)
DNA (1554bp) protein (518aa)
PRD domain protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIT9_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS43812.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
LicR
Displaying 15 items

View Taxonomy