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L3_063_040G1_scaffold_495

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_495_1
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(132..2705)
DNA (2574bp) protein (858aa)
Chaperone protein ClpB n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V662_ESCHE
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
protein disaggregation chaperone
L3_063_040G1_scaffold_495_2
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2836..3567)
DNA (732bp) protein (244aa)
Putative uncharacterized protein yfiH n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V661_ESCHE
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_495_3
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3564..4544)
DNA (981bp) protein (327aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70)
Pseudouridine synthase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V660_ESCHE
L3_063_040G1_scaffold_495_4
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4681..5418
DNA (738bp) protein (246aa)
Outer membrane protein assembly factor BamD n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V659_ESCHE
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
outer membrane assembly lipoprotein YfiO
L3_063_040G1_scaffold_495_5
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5683..6015
DNA (333bp) protein (111aa)
Ribosome-associated inhibitor A n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V658_ESCHE
Enterobacter aerogenes strain DDE1 c23, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31072.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
translation inhibitor protein RaiA
L3_063_040G1_scaffold_495_6
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6260..7420
DNA (1161bp) protein (387aa)
pheA; bifunctional chorismate mutase/prephenate dehydratase (EC:5.4.99.5)
Chorismate mutase/prephenate dehydratase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V657_ESCHE
Chorismate mutase/prephenate dehydratase {ECO:0000313|EMBL:GAB53465.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L3_063_040G1_scaffold_495_7
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7459..8580)
DNA (1122bp) protein (374aa)
chorismate mutase (EC:5.4.99.5)
T-protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V656_ESCHE
T-protein {ECO:0000256|PIRNR:PIRNR001499}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
L3_063_040G1_scaffold_495_8
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8590..9660)
DNA (1071bp) protein (357aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V655_ESCHE
phospho-2-dehydro-3-deoxyheptonate aldolase
L3_063_040G1_scaffold_495_9
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9936..10310
DNA (375bp) protein (125aa)
Putative uncharacterized protein yfiL n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V654_ESCHE
Putative uncharacterized protein yfiL {ECO:0000313|EMBL:GAB53462.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
lipoprotein
L3_063_040G1_scaffold_495_10
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10483..11007
DNA (525bp) protein (175aa)
Putative uncharacterized protein yfiR n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V653_ESCHE
Enterobacter aerogenes strain DDE1 c23, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31077.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_495_11
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11021..12220
DNA (1200bp) protein (400aa)
Putative diguanylate cyclase YfiN n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V652_ESCHE
Enterobacter aerogenes strain DDE1 c23, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31078.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
diguanylate cyclase
L3_063_040G1_scaffold_495_12
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12239..12721
DNA (483bp) protein (161aa)
Putative uncharacterized protein yfiB n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V651_ESCHE
Putative uncharacterized protein yfiB {ECO:0000313|EMBL:GAB53459.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
membrane protein
L3_063_040G1_scaffold_495_13
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12725..14104)
DNA (1380bp) protein (460aa)
Putative uncharacterized protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V650_ESCHE
Putative uncharacterized protein {ECO:0000313|EMBL:GAB53458.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
putative iron-regulated membrane protein
L3_063_040G1_scaffold_495_14
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14158..14583)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V649_ESCHE
Enterobacter aerogenes strain DDE1 c23, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31131.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_495_15
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14735..14917)
DNA (183bp) protein (61aa)
Putative uncharacterized protein ydcA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V648_ESCHE
Putative uncharacterized protein ydcA {ECO:0000313|EMBL:GAB53456.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_063_040G1_scaffold_495_16
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14962..15612)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V647_ESCHE
Putative uncharacterized protein {ECO:0000313|EMBL:GAB53455.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_063_040G1_scaffold_495_17
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15744..16091)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=2 Tax=Enterobacteriaceae RepID=D2TUN0_CITRI
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
L3_063_040G1_scaffold_495_18
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16134..16901)
DNA (768bp) protein (256aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V645_ESCHE
trmD; tRNA (guanine-N(1)-)-methyltransferase
L3_063_040G1_scaffold_495_19
Cedecea neteri, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16932..17027)
DNA (96bp) protein (32aa)
Ribosome maturation factor RimM n=1 Tax=Enterobacter sp. Ag1 RepID=J0M9V2_9ENTR
16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=158822 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="Cedecea neteri.;"
Displaying 19 items

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