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L3_063_040G1_scaffold_502

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_502_1
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..816)
DNA (816bp) protein (272aa)
Lipid A biosynthesis myristoyltransferase {ECO:0000256|HAMAP-Rule:MF_01944}; EC=2.3.1.243 {ECO:0000256|HAMAP-Rule:MF_01944};; Kdo(2)-lauroyl-lipid IV(A) myristoyltransferase {ECO:0000256|HAMAP-Rule:MF_01944}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UWQ8_ESCHE
lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
L3_063_040G1_scaffold_502_2
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(942..2264)
DNA (1323bp) protein (441aa)
Putative metalloprotease YebA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UWQ9_ESCHE
Enterobacter aerogenes strain DDE1 c6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35451.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
yebA; peptidase
L3_063_040G1_scaffold_502_3
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2280..3224)
DNA (945bp) protein (315aa)
Zinc ABC transporter substrate binding periplasmic protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UWR0_ESCHE
Zinc ABC transporter substrate binding periplasmic protein {ECO:0000313|EMBL:GAB50341.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
znuA; high-affinity zinc transporter periplasmic component
L3_063_040G1_scaffold_502_4
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3303..4058
DNA (756bp) protein (252aa)
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Zinc ABC transporter ATP-binding protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UWR1_ESCHE
znuC; zinc ABC transporter ATPase
L3_063_040G1_scaffold_502_5
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4055..4840
DNA (786bp) protein (262aa)
Zinc ABC transporter permease protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UWR2_ESCHE
Zinc ABC transporter permease protein {ECO:0000313|EMBL:GAB50343.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
ABC-3 protein
L3_063_040G1_scaffold_502_6
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4873..5883)
DNA (1011bp) protein (337aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UWR3_ESCHE
ATP-dependent DNA helicase RuvB
L3_063_040G1_scaffold_502_7
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5892..6503)
DNA (612bp) protein (204aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UWR4_ESCHE
ruvA; Holliday junction DNA helicase RuvA
L3_063_040G1_scaffold_502_8
Pluralibacter gergoviae, Pluralibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6614..7135)
DNA (522bp) protein (174aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=61647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pluralibacter.;" source="Pluralibacter gergoviae (Enterobacter gergoviae).;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UWR5_ESCHE
L3_063_040G1_scaffold_502_9
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7166..7906)
DNA (741bp) protein (247aa)
Probable transcriptional regulatory protein YebC n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UWR6_ESCHE
Probable transcriptional regulatory protein YebC {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_063_040G1_scaffold_502_10
Enterobacter sp. 42324, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7934..8377)
DNA (444bp) protein (148aa)
UPI0003C7DCD2 related cluster n=1 Tax=unknown RepID=UPI0003C7DCD2
nudB; dihydroneopterin triphosphate pyrophosphatase
Dihydroneopterin triphosphate pyrophosphatase {ECO:0000313|EMBL:KJM40916.1}; TaxID=1619249 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 42324.;"
L3_063_040G1_scaffold_502_11
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8379..10151)
DNA (1773bp) protein (591aa)
Aspartate--tRNA ligase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UWR8_ESCHE
Enterobacter aerogenes strain DDE1 c6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35442.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
aspartyl-tRNA synthetase
L3_063_040G1_scaffold_502_12
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10405..10971
DNA (567bp) protein (189aa)
Isochorismatase family protein YecD n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UWR9_ESCHE
Enterobacter aerogenes strain DDE1 c6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35441.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
isochorismatase
L3_063_040G1_scaffold_502_13
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10968..11072
DNA (105bp) protein (35aa)
Putative uncharacterized protein yecE n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UWS0_ESCHE
Putative uncharacterized protein yecE {ECO:0000313|EMBL:GAB50351.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_063_040G1_scaffold_502_14
Cronobacter universalis, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11325..11567
DNA (243bp) protein (81aa)
Virulence protein msgA n=1 Tax=Escherichia coli UMNK88 RepID=F4M9C2_ECOLX
virulence protein msgA
Virulence protein MsgA {ECO:0000313|EMBL:CCK15023.1}; TaxID=1074000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter universalis NCTC 9529.;"
L3_063_040G1_scaffold_502_15
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12099..12725
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) RepID=C7BH55_PHOAA
Uncharacterized protein {ECO:0000313|EMBL:CDH25977.1}; TaxID=1398204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. kraussei Becker Underwood.;"
Phage-associated protein
L3_063_040G1_scaffold_502_16
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12722..13096
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Haemophilus parasuis 12939 RepID=U4S8E7_HAEPR
Uncharacterized protein {ECO:0000313|EMBL:CDH25976.1}; TaxID=1398204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. kraussei Becker Underwood.;"
hypothetical protein
L3_063_040G1_scaffold_502_17
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13291..13821)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V208_ESCHE
Putative uncharacterized protein {ECO:0000313|EMBL:GAB52016.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
fljA; Flagellar synthesis: repressor of fliC
L3_063_040G1_scaffold_502_18
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13911..15509)
DNA (1599bp) protein (533aa)
Flagellin n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V209_ESCHE
Flagellin {ECO:0000313|EMBL:GAB52017.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
fliC; flagellin
L3_063_040G1_scaffold_502_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15872..16546)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Cubana str. CFSAN001083 RepID=V2LBA6_SALET
Uncharacterized protein {ECO:0000313|EMBL:ETX63158.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
Displaying 19 items

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