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L3_063_040G1_scaffold_503

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_503_1
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1375
DNA (1374bp) protein (458aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7L9_ESCHE
L3_063_040G1_scaffold_503_2
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1432..1749)
DNA (318bp) protein (106aa)
N,N'-diacetylchitobiose-specific phosphotransferase system enzyme IIA component n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7L7_ESCHE
Enterobacter aerogenes strain DDE1 c2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU32635.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
PTS lactose transporter subunit IIA
L3_063_040G1_scaffold_503_3
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1752..2057)
DNA (306bp) protein (102aa)
N,N'-diacetylchitobiose-specific phosphotransferase system enzyme IIB component n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7L6_ESCHE
N,N'-diacetylchitobiose-specific phosphotransferase system enzyme IIB component {ECO:0000313|EMBL:GAB53974.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_063_040G1_scaffold_503_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2252..3577
DNA (1326bp) protein (442aa)
PTS system, cellobiose-specific IIC component n=1 Tax=Citrobacter sp. KTE32 RepID=R8VS86_9ENTR
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
PTS system protein, cellobiose-specific IIC component
L3_063_040G1_scaffold_503_5
Thermoanaerobacter sp. X514, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3592..4905
DNA (1314bp) protein (438aa)
Glycoside hydrolase, family 4 n=3 Tax=Thermoanaerobacter RepID=B0K275_THEPX
glycoside hydrolase family protein
Glycoside hydrolase, family 4 {ECO:0000313|EMBL:ABY91583.1}; TaxID=399726 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. (strain X514).;"
L3_063_040G1_scaffold_503_6
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(4882..5625)
DNA (744bp) protein (248aa)
Transcriptional regulator, GntR family n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AG81_SEBTE
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACZ10707.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L3_063_040G1_scaffold_503_7
Hafnia alvei, Hafnia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5713..6858
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Enterobacteriaceae bacterium 9_2_54FAA RepID=E5YJ81_9ENTR
silent information regulator protein Sir2
Silent information regulator protein Sir2 {ECO:0000313|EMBL:AIU71353.1}; TaxID=1453496 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Hafnia.;" source="Hafnia alvei FB1.;"
L3_063_040G1_scaffold_503_8
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6891..8018)
DNA (1128bp) protein (376aa)
2-iminoacetate synthase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7L5_ESCHE
2-iminoacetate synthase {ECO:0000313|EMBL:GAB53973.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
thiH; 2-iminoacetate synthase
L3_063_040G1_scaffold_503_9
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8015..8785)
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Thiazole synthase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7L4_ESCHE
thiG; thiazole biosynthesis protein ThiG
L3_063_040G1_scaffold_503_10
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8787..8987)
DNA (201bp) protein (67aa)
Sulfur carrier protein ThiS n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7L3_ESCHE
Enterobacter aerogenes strain DDE1 c2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU32631.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
thiamine biosynthesis protein ThiS
L3_063_040G1_scaffold_503_11
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8971..9726)
DNA (756bp) protein (252aa)
Sulfur carrier protein ThiS adenylyltransferase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7L2_ESCHE
Enterobacter aerogenes strain DDE1 c2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU32630.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
thiF; thiamin biosynthesis protein ThiF
L3_063_040G1_scaffold_503_12
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9713..10354)
DNA (642bp) protein (214aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium (strain FGI 57).;"
Thiamine-phosphate synthase n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M898_ENTBF
thiamine-phosphate diphosphorylase
L3_063_040G1_scaffold_503_13
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10354..12252)
DNA (1899bp) protein (633aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
Phosphomethylpyrimidine synthase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7L0_ESCHE
phosphomethylpyrimidine synthase ThiC
L3_063_040G1_scaffold_503_14
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12547..13065)
DNA (519bp) protein (173aa)
Regulator of sigma D n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7K9_ESCHE
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
anti-RNA polymerase sigma 70 factor
L3_063_040G1_scaffold_503_15
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13165..13941
DNA (777bp) protein (259aa)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016202};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
NADH pyrophosphatase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7K8_ESCHE
putative NADH pyrophosphatase
L3_063_040G1_scaffold_503_16
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13977..15041
DNA (1065bp) protein (355aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7K7_ESCHE
L3_063_040G1_scaffold_503_17
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15056..15727
DNA (672bp) protein (224aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
endonuclease V (EC:3.1.21.7)
Endonuclease V n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7K6_ESCHE
L3_063_040G1_scaffold_503_18
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15772..16362
DNA (591bp) protein (197aa)
Putative uncharacterized protein yjaG n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7K5_ESCHE
Enterobacter aerogenes strain DDE1 c2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU32623.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
Displaying 18 items

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