ggKbase home page

L3_063_040G1_scaffold_504

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_504_1
Pantoea sp. AS-PWVM4, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..184
DNA (183bp) protein (61aa)
Major outer membrane lipoprotein n=15 Tax=Enterobacteriaceae RepID=B5XQH5_KLEP3
murein lipoprotein
Major outer membrane lipoprotein {ECO:0000313|EMBL:ERK10299.1}; TaxID=1332069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. AS-PWVM4.;"
L3_063_040G1_scaffold_504_2
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(254..1270)
DNA (1017bp) protein (339aa)
Putative L,D-transpeptidase YnhG {ECO:0000313|EMBL:EJI87509.1}; EC=2.-.-.- {ECO:0000313|EMBL:EJI87509.1};; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
Putative L,D-transpeptidase YnhG n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IKY7_9ENTR
murein L,D-transpeptidase
L3_063_040G1_scaffold_504_3
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1366..1782)
DNA (417bp) protein (139aa)
cysteine desufuration protein SufE n=1 Tax=Enterobacter cloacae RepID=UPI0002E834F9
cysteine desufuration protein SufE
Cysteine desulfuration protein SufE {ECO:0000256|HAMAP-Rule:MF_01832, ECO:0000256|SAAS:SAAS00009949}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
L3_063_040G1_scaffold_504_4
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1796..3016)
DNA (1221bp) protein (407aa)
Cysteine desulfurase {ECO:0000256|HAMAP-Rule:MF_01831, ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_01831, ECO:0000256|RuleBase:RU004506};; Selenocysteine beta-lyase {ECO:0000256|HAMAP-Rule:MF_01831}; Selenocysteine lyase {ECO:0000256|HAMAP-Rule:MF_01831}; Selenocysteine reductase {ECO:0000256|HAMAP-Rule:MF_01831}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
bifunctional cysteine desulfurase/selenocysteine lyase n=1 Tax=Enterobacter cloacae RepID=UPI00035E7252
cysteine sulfinate desulfinase
L3_063_040G1_scaffold_504_5
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3013..4284)
DNA (1272bp) protein (424aa)
Cysteine desulfurase activator complex subunit SufD n=1 Tax=Enterobacter sp. R4-368 RepID=R9VHV8_9ENTR
cysteine desulfurase activator complex subunit SufD
Cysteine desulfurase activator complex subunit SufD {ECO:0000313|EMBL:AGN84417.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_504_6
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4259..5005)
DNA (747bp) protein (249aa)
FeS assembly ATPase SufC n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YHM8_9ENTR
Cysteine desulfurase {ECO:0000313|EMBL:KDE34260.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
sufC; cysteine desulfurase
L3_063_040G1_scaffold_504_7
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5022..6506)
DNA (1485bp) protein (495aa)
FeS assembly protein SufB n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IKY2_9ENTR
SufB protein {ECO:0000313|EMBL:KIS44643.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
cysteine desulfurase
L3_063_040G1_scaffold_504_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6515..6883)
DNA (369bp) protein (123aa)
Protein sufA n=2 Tax=Citrobacter RepID=C1M3Z7_9ENTR
sufA; iron-sulfur cluster assembly scaffold protein
Protein sufA {ECO:0000313|EMBL:ETX64637.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L3_063_040G1_scaffold_504_9
unknown

Not on your lists

6924..7139
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Enterobacter cloacae subsp. cloacae NCTC 9394 RepID=D6DT35_ENTCL
hypothetical protein
L3_063_040G1_scaffold_504_10
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7259..7870)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Klebsiella oxytoca 10-5246 RepID=H3MKQ9_KLEOX
Histidine phosphatase {ECO:0000313|EMBL:KAJ95941.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
fructose-2,6-bisphosphatase
L3_063_040G1_scaffold_504_11
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8372..9010)
DNA (639bp) protein (213aa)
Leucine efflux protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YH69_9ENTR
LeuE protein {ECO:0000313|EMBL:KIS44666.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
leucine export protein LeuE
L3_063_040G1_scaffold_504_12
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9127..9777)
DNA (651bp) protein (217aa)
Putative periplasmic or secreted protein n=1 Tax=Serratia marcescens FGI94 RepID=L0MFP7_SERMA
Metal-binding protein ZinT {ECO:0000313|EMBL:GAL58017.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
putative periplasmic or secreted protein
L3_063_040G1_scaffold_504_13
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9965..10174
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YQY0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDE35011.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
hypothetical protein
L3_063_040G1_scaffold_504_14
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10358..11275)
DNA (918bp) protein (306aa)
Lipid A biosynthesis palmitoleoyltransferase {ECO:0000256|HAMAP-Rule:MF_01943}; EC=2.3.1.242 {ECO:0000256|HAMAP-Rule:MF_01943};; Kdo(2)-lipid IV(A) palmitoleoyltransferase {ECO:0000256|HAMAP-Rule:MF_01943}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
lipid A biosynthesis palmitoleoyl acyltransferase n=1 Tax=Enterobacter cloacae RepID=UPI00030C4ADC
lipid A biosynthesis palmitoleoyl acyltransferase
L3_063_040G1_scaffold_504_15
Enterobacter sp. DC4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11485..11895)
DNA (411bp) protein (137aa)
1,4-dihydroxy-2-naphthoyl-CoA hydrolase {ECO:0000256|HAMAP-Rule:MF_01936}; Short=DHNA-CoA hydrolase {ECO:0000256|HAMAP-Rule:MF_01936};; EC=3.1.2.28 {ECO:0000256|HAMAP-Rule:MF_01936};; DHNA-CoA thioesterase {ECO:0000256|HAMAP-Rule:MF_01936}; TaxID=1395580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. DC4.;"
Esterase YdiI n=2 Tax=Enterobacter cloacae complex RepID=V3HF05_ENTCL
thioesterase
L3_063_040G1_scaffold_504_16
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11892..14948)
DNA (3057bp) protein (1019aa)
FAD binding domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YHL9_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS42442.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
membrane protein
L3_063_040G1_scaffold_504_17
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15143..16255
DNA (1113bp) protein (371aa)
membrane protein n=1 Tax=Enterobacter cloacae RepID=UPI0002FD2FC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ74145.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
Displaying 17 items

View Taxonomy