ggKbase home page

L3_063_040G1_scaffold_543

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_543_1
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

282..1388
DNA (1107bp) protein (369aa)
Initiator Replication family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VET9_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48009.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
putative replication initiator protein
L3_063_040G1_scaffold_543_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1698..1919)
DNA (222bp) protein (74aa)
Cro/C1-type HTH DNA-binding domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VH80_CLOBI
Cro/C1-type HTH DNA-binding domain protein {ECO:0000313|EMBL:EQK40037.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
XRE family transcriptional regulator
L3_063_040G1_scaffold_543_3
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1929..2417)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VH00_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK40036.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
hypothetical protein
L3_063_040G1_scaffold_543_4
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2437..2913)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VFY0_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48007.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_040G1_scaffold_543_5
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2941..3156)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VHN2_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK40276.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
lipoprotein
L3_063_040G1_scaffold_543_6
unknown

Not on your lists

3317..3409
DNA (93bp) protein (31aa)

This feature has no annotations

L3_063_040G1_scaffold_543_7
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3467..3835)
DNA (369bp) protein (123aa)
Putative dNA-binding protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VET2_CLOBI
Putative dNA-binding protein {ECO:0000313|EMBL:EQK40033.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
L3_063_040G1_scaffold_543_8
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4112..4489
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VH76_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK40032.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
L3_063_040G1_scaffold_543_9
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4556..4810)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4V977_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48004.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_063_040G1_scaffold_543_10
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5001..5462)
DNA (462bp) protein (154aa)
MarR family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VJK9_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48003.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
transcriptional regulator
L3_063_040G1_scaffold_543_11
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5627..7258)
DNA (1632bp) protein (544aa)
Amidase family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VLV8_CLOBI
Amidase family protein {ECO:0000313|EMBL:EQK41642.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
amidase family protein
L3_063_040G1_scaffold_543_12
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7644..7997
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ48001.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_063_040G1_scaffold_543_13
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8499..9575)
DNA (1077bp) protein (359aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
His Kinase A domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VHP1_CLOBI
two-component sensor histidine kinase
L3_063_040G1_scaffold_543_14
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9607..10296)
DNA (690bp) protein (230aa)
Transcriptional regulatory family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VGP7_CLOBI
PhoB family transcriptional regulator {ECO:0000313|EMBL:KGJ47999.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
two-component response regulator
L3_063_040G1_scaffold_543_15
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10321..10992)
DNA (672bp) protein (224aa)
D-alanyl-D-alanine carboxypeptidase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VHL4_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ47998.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
D-alanyl-D-alanine carboxypeptidase
L3_063_040G1_scaffold_543_16
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11815..12228
DNA (414bp) protein (138aa)
Universal stress family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VLL7_CLOBI
Universal stress family protein {ECO:0000313|EMBL:EQK41641.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
universal stress protein
L3_063_040G1_scaffold_543_17
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12301..13686)
DNA (1386bp) protein (462aa)
H+ symporter family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4V984_CLOBI
Amino acid transporter {ECO:0000313|EMBL:KGJ47996.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
amino acid/peptide transporter
L3_063_040G1_scaffold_543_18
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14081..14350)
DNA (270bp) protein (90aa)
Transcriptional regulator, AbrB family domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VD48_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ47995.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
AbrB family transcriptional regulator
Displaying 18 items

View Taxonomy