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L3_063_040G1_scaffold_576

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_576_1
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1..2793
DNA (2793bp) protein (931aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:588 RepID=R7PRT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF26978.1}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
hypothetical protein
L3_063_040G1_scaffold_576_2
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2876..3973)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:588 RepID=R7PMV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF26979.1}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
hypothetical protein
L3_063_040G1_scaffold_576_3
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4214..4951
DNA (738bp) protein (246aa)
30S ribosomal protein S2 n=1 Tax=Dialister sp. CAG:357 RepID=R7CPY0_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
30S ribosomal protein S2
L3_063_040G1_scaffold_576_4
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4989..5636
DNA (648bp) protein (216aa)
Elongation factor Ts n=1 Tax=Dialister sp. CAG:588 RepID=R7PRD5_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
tsf; elongation factor Ts
L3_063_040G1_scaffold_576_5
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5667..6425
DNA (759bp) protein (253aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
Uridylate kinase n=1 Tax=Dialister sp. CAG:588 RepID=R7PRU4_9FIRM
UMP kinase
L3_063_040G1_scaffold_576_6
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6431..6988
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Dialister sp. CAG:588 RepID=R7PMV8_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
frr; ribosome recycling factor
L3_063_040G1_scaffold_576_7
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6988..7266
DNA (279bp) protein (93aa)
Chemoreceptor glutamine deamidase CheD n=1 Tax=Dialister sp. CAG:588 RepID=R7PQ18_9FIRM
Chemoreceptor glutamine deamidase CheD {ECO:0000313|EMBL:CDF26990.1}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
L3_063_040G1_scaffold_576_8
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7220..7948
DNA (729bp) protein (243aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:486.;"
Isoprenyl transferase n=1 Tax=Dialister sp. CAG:486 RepID=R6A9W0_9FIRM
UDP pyrophosphate synthase
L3_063_040G1_scaffold_576_9
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7945..8760
DNA (816bp) protein (272aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
Phosphatidate cytidylyltransferase n=1 Tax=Dialister sp. CAG:588 RepID=R7PRE0_9FIRM
phosphatidate cytidylyltransferase
L3_063_040G1_scaffold_576_10
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8772..9932
DNA (1161bp) protein (387aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
dxr; putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Dialister sp. CAG:357 RepID=R7CP39_9FIRM
L3_063_040G1_scaffold_576_11
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9929..10951
DNA (1023bp) protein (341aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
RIP metalloprotease RseP n=1 Tax=Dialister sp. CAG:588 RepID=R7PMW3_9FIRM
membrane-associated zinc metalloprotease
L3_063_040G1_scaffold_576_12
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10970..12034
DNA (1065bp) protein (355aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Dialister sp. CAG:588 RepID=R7PQ22_9FIRM
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L3_063_040G1_scaffold_576_13
Dialister sp. CAG:588, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12035..12349
DNA (315bp) protein (105aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1262871 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:588.;"
Proline--tRNA ligase n=1 Tax=Dialister sp. CAG:588 RepID=R7PPG9_9FIRM
prolyl-tRNA synthetase
Displaying 13 items

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