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L3_063_040G1_scaffold_605

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_605_1
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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361..915
-----------------
DNA (555bp)
protein (185aa)
Protein YrdA n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N3X5_KLEOX
Protein YrdA {ECO:0000313|EMBL:EHT10251.1}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5250.;"
transferase
L3_063_040G1_scaffold_605_2
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(891..1148)
-----------------
DNA (258bp)
protein (86aa)
Uncharacterized protein n=1 Tax=Klebsiella oxytoca M5al RepID=K6K521_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:EKP25293.1}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
hypothetical protein
L3_063_040G1_scaffold_605_3
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1145..1963)
-----------------
DNA (819bp)
protein (273aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Klebsiella oxytoca M5al RepID=K6KZG6_KLEOX
L3_063_040G1_scaffold_605_4
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1967..2539)
-----------------
DNA (573bp)
protein (191aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
Threonylcarbamoyl-AMP synthase n=1 Tax=Klebsiella oxytoca M5al RepID=K6JE95_KLEOX
tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein
L3_063_040G1_scaffold_605_5
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2544..3086)
-----------------
DNA (543bp)
protein (181aa)
DNA topoisomerase type IA zn finger domain-containing protein n=1 Tax=Klebsiella oxytoca M5al RepID=K6KHI4_KLEOX
DNA topoisomerase type IA zn finger domain-containing protein {ECO:0000313|EMBL:EKP25290.1}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
DNA topoisomerase type IA zn finger domain-containing protein
L3_063_040G1_scaffold_605_6
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3114..3587)
-----------------
DNA (474bp)
protein (158aa)
Protein Smg n=4 Tax=Klebsiella RepID=H3LDW2_KLEOX
Protein Smg {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
hypothetical protein
L3_063_040G1_scaffold_605_7
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3559..4683)
-----------------
DNA (1125bp)
protein (375aa)
Uncharacterized protein n=1 Tax=Klebsiella oxytoca M5al RepID=K6K517_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:EKP25288.1}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
DNA processing protein DprA
L3_063_040G1_scaffold_605_8
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4813..5322
-----------------
DNA (510bp)
protein (170aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
Peptide deformylase n=1 Tax=Klebsiella oxytoca M5al RepID=K6KZG3_KLEOX
peptide deformylase
L3_063_040G1_scaffold_605_9
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5337..6284
-----------------
DNA (948bp)
protein (316aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Klebsiella oxytoca M5al RepID=K6JE91_KLEOX
L3_063_040G1_scaffold_605_10
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6259..7626
-----------------
DNA (1368bp)
protein (456aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.176 {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00011820};; 16S rRNA m5C967 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01856}; rRNA (cytosine-C(5)-)-methyltransferase RsmB {ECO:0000256|HAMAP-Rule:MF_01856}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5250.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N3Y4_KLEOX
ribosomal RNA small subunit methyltransferase B
L3_063_040G1_scaffold_605_11
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7648..9024
-----------------
DNA (1377bp)
protein (459aa)
Potassium transporter peripheral membrane component n=2 Tax=Klebsiella oxytoca RepID=G8WKR6_KLEOK
trkA; potassium transporter peripheral membrane component
Trk system potassium uptake protein trkA {ECO:0000313|EMBL:EWF61682.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
L3_063_040G1_scaffold_605_12
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9165..9578
-----------------
DNA (414bp)
protein (138aa)
Large-conductance mechanosensitive channel n=1 Tax=Klebsiella oxytoca M5al RepID=K6KHL3_KLEOX
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
mscL; large-conductance mechanosensitive channel
L3_063_040G1_scaffold_605_13
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9532..9792)
-----------------
DNA (261bp)
protein (87aa)
Putative cytoplasmic protein n=1 Tax=Klebsiella oxytoca M5al RepID=K6K513_KLEOX
Putative cytoplasmic protein {ECO:0000313|EMBL:EKP25283.1}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
ribosome rescue factor A
L3_063_040G1_scaffold_605_14
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9851..10276)
-----------------
DNA (426bp)
protein (142aa)
HTH-type transcriptional regulator zntR n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N3Y8_KLEOX
HTH-type transcriptional regulator zntR {ECO:0000313|EMBL:EHT10264.1}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5250.;"
HTH-type transcriptional regulator zntR
L3_063_040G1_scaffold_605_15
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10279..10647)
-----------------
DNA (369bp)
protein (123aa)
Uncharacterized protein n=1 Tax=Klebsiella oxytoca M5al RepID=K6JE87_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:EKP25281.1}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
hypothetical protein
L3_063_040G1_scaffold_605_16
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10755..11060)
-----------------
DNA (306bp)
protein (102aa)
50S ribosomal protein L17 n=29 Tax=Enterobacteriaceae RepID=D2TN93_CITRI
rplQ; 50S ribosomal subunit protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE52.;"
Displaying 16 items

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