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L3_063_040G1_scaffold_613

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_613_1
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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335..889
DNA (555bp) protein (185aa)
Putative uncharacterized protein yrdA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7Q9_ESCHE
Putative uncharacterized protein yrdA {ECO:0000313|EMBL:GAB54017.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
yrdA; protein YrdA
L3_063_040G1_scaffold_613_2
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(865..1122)
DNA (258bp) protein (86aa)
Putative uncharacterized protein yrdB n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7R0_ESCHE
Enterobacter aerogenes strain DDE1 c36, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31641.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
yrdB; hypothetical protein
L3_063_040G1_scaffold_613_3
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1119..1937)
DNA (819bp) protein (273aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7R1_ESCHE
L3_063_040G1_scaffold_613_4
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1942..2514)
DNA (573bp) protein (191aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Threonylcarbamoyl-AMP synthase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7R2_ESCHE
hypothetical protein
L3_063_040G1_scaffold_613_5
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2507..3058)
DNA (552bp) protein (184aa)
Putative uncharacterized protein yrdD n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7R3_ESCHE
Putative uncharacterized protein yrdD {ECO:0000313|EMBL:GAB54021.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_063_040G1_scaffold_613_6
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3084..3557)
DNA (474bp) protein (158aa)
Protein Smg n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7R4_ESCHE
Protein Smg {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_613_7
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3529..4650)
DNA (1122bp) protein (374aa)
Smf protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7R5_ESCHE
Enterobacter aerogenes strain DDE1 c36, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31636.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
smf; hypothetical protein
L3_063_040G1_scaffold_613_8
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4781..5287
DNA (507bp) protein (169aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Peptide deformylase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7R6_ESCHE
def; peptide deformylase
L3_063_040G1_scaffold_613_9
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5312..6259
DNA (948bp) protein (316aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7R7_ESCHE
L3_063_040G1_scaffold_613_10
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6320..7612
DNA (1293bp) protein (431aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.176 {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00011820};; 16S rRNA m5C967 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01856}; rRNA (cytosine-C(5)-)-methyltransferase RsmB {ECO:0000256|HAMAP-Rule:MF_01856}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7R8_ESCHE
Ribosomal RNA small subunit methyltransferase B
L3_063_040G1_scaffold_613_11
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7648..9024
DNA (1377bp) protein (459aa)
Trk system potassium uptake protein TrkA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7R9_ESCHE
TrkA protein {ECO:0000313|EMBL:KIU31632.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
trkA; potassium transporter peripheral membrane component
L3_063_040G1_scaffold_613_12
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9165..9578
DNA (414bp) protein (138aa)
Large-conductance mechanosensitive channel n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7S0_ESCHE
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
mscL; large-conductance mechanosensitive channel
L3_063_040G1_scaffold_613_13
Cronobacter muytjensii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9579..9794)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Cronobacter muytjensii 530 RepID=K8AA39_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CCJ77020.1}; TaxID=1208586 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter muytjensii 530.;"
hypothetical protein
L3_063_040G1_scaffold_613_14
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9846..10268)
DNA (423bp) protein (141aa)
MerR family transcriptional regulator ZntR n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7S2_ESCHE
MerR family transcriptional regulator ZntR {ECO:0000313|EMBL:GAB54030.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
zntR; zinc-responsive transcriptional regulator
L3_063_040G1_scaffold_613_15
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10265..10636)
DNA (372bp) protein (124aa)
Putative uncharacterized protein yhdN n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7S3_ESCHE
Putative uncharacterized protein yhdN {ECO:0000313|EMBL:GAB54031.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_063_040G1_scaffold_613_16
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10737..10868)
DNA (132bp) protein (44aa)
50S ribosomal protein L17 n=29 Tax=Enterobacteriaceae RepID=D2TN93_CITRI
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|RuleBase:RU000661}; TaxID=290338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696).;"
Displaying 16 items

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