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L3_063_040G1_scaffold_78

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Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_78_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..423)
DNA (423bp) protein (141aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EEP53677.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EEP53677.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
sudA: sulfide dehydrogenase subunit alpha (EC:1.8.-.- 1.18.1.2)
Glutamate synthase , homotetrameric n=4 Tax=Clostridium butyricum RepID=B1QWW4_CLOBU
L3_063_040G1_scaffold_78_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(423..1313)
DNA (891bp) protein (297aa)
Conserved electron-transfer protein n=3 Tax=Clostridium butyricum RepID=B1QWW5_CLOBU
Oxidoreductase FAD/NAD {ECO:0000313|EMBL:EEP53045.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
2-polyprenylphenol hydroxylase-like oxidoreductase
L3_063_040G1_scaffold_78_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1491..2297)
DNA (807bp) protein (269aa)
Putative signal transduction histidine kinase regulating citrate/malate metabolism n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBI3_CLOBU
Putative signal transduction histidine kinase regulating citrate/malate metabolism {ECO:0000313|EMBL:EEP53057.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
histidine kinase
L3_063_040G1_scaffold_78_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2331..2711)
DNA (381bp) protein (127aa)
UPI0003D622C3 related cluster n=1 Tax=unknown RepID=UPI0003D622C3
Uncharacterized protein {ECO:0000313|EMBL:ETI90915.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L3_063_040G1_scaffold_78_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2726..3973)
DNA (1248bp) protein (416aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Putative sensor histidine kinase n=2 Tax=Clostridium butyricum RepID=B1QWW7_CLOBU
signal transduction histidine kinase regulating citrate/malate metabolism
L3_063_040G1_scaffold_78_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4200..4760
DNA (561bp) protein (187aa)
Methyltransferase type 11 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JI33_CLOBU
Methyltransferase type 11 {ECO:0000313|EMBL:KHD16530.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
methyltransferase type 11
L3_063_040G1_scaffold_78_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4849..4977)
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QWW9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53928.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L3_063_040G1_scaffold_78_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5236..6417)
DNA (1182bp) protein (394aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBJ0_CLOBU
class V aminotransferase
L3_063_040G1_scaffold_78_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6459..7592)
DNA (1134bp) protein (378aa)
bcpC; phosphonopyruvate decarboxylase BcpC (EC:4.1.1.82)
Phosphonopyruvate decarboxylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3B4_CLOBU
Phosphoenolpyruvate decarboxylase {ECO:0000313|EMBL:KHD16527.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L3_063_040G1_scaffold_78_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7664..8962)
DNA (1299bp) protein (433aa)
Phosphoenolpyruvate mutase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGK0_CLOBU
Phosphoenolpyruvate phosphomutase {ECO:0000313|EMBL:KHD16526.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
cytidyltransferase-like protein
L3_063_040G1_scaffold_78_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9006..9785)
DNA (780bp) protein (260aa)
Nucleotidyl transferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JI41_CLOBU
Nucleotidyl transferase {ECO:0000313|EMBL:KHD16525.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
nucleotidyl transferase
L3_063_040G1_scaffold_78_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10049..11062)
DNA (1014bp) protein (338aa)
Putative lipoprotein n=2 Tax=Clostridium butyricum RepID=B1QWX4_CLOBU
Putative liporotein {ECO:0000313|EMBL:EEP54441.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_063_040G1_scaffold_78_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11384..12637)
DNA (1254bp) protein (418aa)
UPI0003D5C559 related cluster n=1 Tax=unknown RepID=UPI0003D5C559
Uncharacterized protein {ECO:0000313|EMBL:KJZ87424.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
cell wall binding repeat-containing protein
L3_063_040G1_scaffold_78_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12779..14152)
DNA (1374bp) protein (458aa)
Sodium:dicarboxylate symporter n=3 Tax=Clostridium butyricum RepID=C4IHD8_CLOBU
Proton/sodium-glutamate symport protein {ECO:0000313|EMBL:KJZ83755.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sodium:dicarboxylate symporter family protein
L3_063_040G1_scaffold_78_15
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14287..15222)
DNA (936bp) protein (312aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLL0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85307.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
succinylglutamate desuccinylase/aspartoacylase
L3_063_040G1_scaffold_78_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15518..16099)
DNA (582bp) protein (194aa)
Putative transcription regulator n=2 Tax=Clostridium butyricum RepID=C4IHE0_CLOBU
TetR family transcriptional regulator {ECO:0000313|EMBL:KHD16520.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
TetR family transcriptional regulator
L3_063_040G1_scaffold_78_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16244..16867)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASI6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35679.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_063_040G1_scaffold_78_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17029..17910)
DNA (882bp) protein (294aa)
Metallo-beta-lactamase superfamily exported protein n=2 Tax=Clostridium butyricum RepID=B1QWF7_CLOBU
Metallo-beta-lactamase superfamily exported protein {ECO:0000313|EMBL:EEP53072.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
metallo-beta-lactamase superfamily exported protein
L3_063_040G1_scaffold_78_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18106..18963
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUJ0_CLOBU
Two-component response regulator yesN {ECO:0000313|EMBL:KJZ83729.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DNA-binding domain-containing protein, AraC-type
L3_063_040G1_scaffold_78_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19088..22114)
DNA (3027bp) protein (1009aa)
cbgA; beta-galactosidase CbgA (EC:3.2.1.23)
Beta-galactosidase (Lactase) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLK3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83738.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_063_040G1_scaffold_78_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22162..23217)
DNA (1056bp) protein (352aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
mro; aldose 1-epimerase Mro (EC:5.1.3.3)
UPI0003D59D54 related cluster n=1 Tax=unknown RepID=UPI0003D59D54
L3_063_040G1_scaffold_78_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23408..24955
DNA (1548bp) protein (516aa)
UPI0003D60708 related cluster n=1 Tax=unknown RepID=UPI0003D60708
Histidine kinase {ECO:0000313|EMBL:KHD16514.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
two component transcriptional regulator, AraC family
L3_063_040G1_scaffold_78_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24987..26780
DNA (1794bp) protein (598aa)
UPI0003D5ADDA related cluster n=1 Tax=unknown RepID=UPI0003D5ADDA
Histidine kinase {ECO:0000313|EMBL:KHD16513.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
histidine kinase internal region
L3_063_040G1_scaffold_78_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26834..28528)
DNA (1695bp) protein (565aa)
Putative methyl-accepting chemotaxis protein n=2 Tax=Clostridium butyricum RepID=B1QWF2_CLOBU
Putative methyl-accepting chemotaxis protein TlpC {ECO:0000313|EMBL:EEP53109.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
methyl-accepting chemotaxis protein
L3_063_040G1_scaffold_78_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28675..30759)
DNA (2085bp) protein (695aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Beta-galactosidase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z738_CLOBU
Beta-galactosidase
L3_063_040G1_scaffold_78_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30927..31769)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport system inner membrane component n=2 Tax=Clostridium butyricum RepID=M8K838_CLOBU
Alpha-arabinosides ABC transport system, permease protein AraQ {ECO:0000313|EMBL:KJZ83770.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
binding-protein-dependent transport systems inner membrane component
L3_063_040G1_scaffold_78_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31762..32655)
DNA (894bp) protein (298aa)
L-arabinose transport system permease protein AraP n=4 Tax=Clostridium butyricum RepID=B1QWE9_CLOBU
Nucleoside ABC transporter, permease protein 1 {ECO:0000313|EMBL:KJZ83768.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
binding-protein-dependent transport systems inner membrane component
L3_063_040G1_scaffold_78_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32821..34125)
DNA (1305bp) protein (435aa)
UPI0003D5ACD8 related cluster n=1 Tax=unknown RepID=UPI0003D5ACD8
Lactose transport system {ECO:0000313|EMBL:ETI90939.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
extracellular solute-binding protein
L3_063_040G1_scaffold_78_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34371..35372)
DNA (1002bp) protein (334aa)
UPI0003D639F4 related cluster n=1 Tax=unknown RepID=UPI0003D639F4
LacI family transcriptional regulator {ECO:0000313|EMBL:KHD16507.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
LacI family transcriptional regulator
L3_063_040G1_scaffold_78_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35517..36038)
DNA (522bp) protein (174aa)
putative NADH dehydrogenase/NAD(P)H nitroreductase (EC:1.-.-.-)
Fmn/NADPH-binding flavoprotein n=2 Tax=Clostridium butyricum RepID=M8JLJ4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35665.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Displaying items 1-30 of 83 in total

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