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L3_063_052G1_scaffold_80

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_80_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52..963)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCE6_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|SAAS:SAAS00015186}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_063_052G1_scaffold_80_2
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(968..2008)
DNA (1041bp) protein (347aa)
Putative gluconeogenesis factor n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YCA2_9FIRM
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_063_052G1_scaffold_80_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(2045..2905)
DNA (861bp) protein (287aa)
UPF0042 nucleotide-binding protein N510_02870 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZEH6_9FIRM
Nucleotide-binding protein N510_02870 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_063_052G1_scaffold_80_4
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2919..3119)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VZN0_DESAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV63008.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
L3_063_052G1_scaffold_80_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(3121..4053)
DNA (933bp) protein (311aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XT10_9FIRM
L3_063_052G1_scaffold_80_6
unknown

Not on your lists

4076..4747
DNA (672bp) protein (224aa)

This feature has no annotations

L3_063_052G1_scaffold_80_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4686..6035
DNA (1350bp) protein (450aa)
Magnesium transporter n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NXX4_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
magnesium transporter
L3_063_052G1_scaffold_80_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6105..6608)
DNA (504bp) protein (168aa)
Transcription elongation factor GreA n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPJ1_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
transcription elongation factor GreA
L3_063_052G1_scaffold_80_9
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

6812..7219
DNA (408bp) protein (136aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Mini-ribonuclease 3 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YCX2_9FIRM
hypothetical protein
L3_063_052G1_scaffold_80_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7254..9017
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48145.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
fibronectin-binding protein
L3_063_052G1_scaffold_80_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9293..9757
DNA (465bp) protein (155aa)
bltD; diamine N-acetyltransferase (EC:2.3.1.57)
Putative diamine N-acetyltransferase n=2 Tax=Oscillibacter RepID=U2QDU8_9FIRM
Putative diamine N-acetyltransferase {ECO:0000313|EMBL:ERK65619.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_063_052G1_scaffold_80_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9912..10916)
DNA (1005bp) protein (335aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAY8_9FIRM
L3_063_052G1_scaffold_80_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11014..11703)
DNA (690bp) protein (230aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAY9_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_063_052G1_scaffold_80_14
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(11707..13032)
DNA (1326bp) protein (442aa)
GTPase (EC:3.6.1.-)
GTPase Der n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZLL2_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_063_052G1_scaffold_80_15
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(13179..14555)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y0I0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15504.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_063_052G1_scaffold_80_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14982..16586
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47521.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_063_052G1_scaffold_80_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16595..17563
DNA (969bp) protein (323aa)
Dolichol-phosphate mannosyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAZ4_9FIRM
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:EGJ47522.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Glycosyltransferases involved in cell wall biogenesis
L3_063_052G1_scaffold_80_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17544..17978
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47523.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
gtrA; GtrA containing transmembrane protein
L3_063_052G1_scaffold_80_19
unknown

Not on your lists

comp(18296..18400)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_063_052G1_scaffold_80_20
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(18805..19251)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13641.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
beta-D-galactosidase
L3_063_052G1_scaffold_80_21
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19548..20318
DNA (771bp) protein (257aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYV9_9CLOT
Transcriptional regulator, IclR family, C-terminal domain protein {ECO:0000313|EMBL:EDO59736.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
transcriptional regulator
L3_063_052G1_scaffold_80_22
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20340..21398
DNA (1059bp) protein (353aa)
BNR repeat-like domain protein n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U2LE60_TRESO
Uncharacterized protein {ECO:0000313|EMBL:KGK90003.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
L3_063_052G1_scaffold_80_23
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21404..22318
DNA (915bp) protein (305aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FMV1_9CLOT
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:KGK89987.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
dihydrodipicolinate synthetase
L3_063_052G1_scaffold_80_24
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22354..23391
DNA (1038bp) protein (346aa)
Tripartite tricarboxylate transporter family receptor n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U1FNW0_TRESO
Uncharacterized protein {ECO:0000313|EMBL:KGK89988.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
C4-dicarboxylate ABC transporter
L3_063_052G1_scaffold_80_25
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

23480..23947
DNA (468bp) protein (156aa)
Tripartite tricarboxylate transporter TctB family protein n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U1GYG8_TRESO
Tripartite tricarboxylate transporter TctB family protein {ECO:0000313|EMBL:ERF61589.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536.;"
hypothetical protein
L3_063_052G1_scaffold_80_26
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23964..25475
DNA (1512bp) protein (504aa)
Tripartite tricarboxylate transporter TctA family protein n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U2LEC4_TRESO
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KGK89990.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
L3_063_052G1_scaffold_80_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25573..26571
DNA (999bp) protein (333aa)
Putative ribokinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDB6_9FIRM
Putative ribokinase {ECO:0000313|EMBL:EDS10468.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
PfkB domain-containing protein
L3_063_052G1_scaffold_80_28
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26635..27249
DNA (615bp) protein (205aa)
SIS domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDB7_9FIRM
SIS domain protein {ECO:0000313|EMBL:EDS10469.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
sugar isomerase (SIS)
L3_063_052G1_scaffold_80_29
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27301..27708
DNA (408bp) protein (136aa)
RbsD/FucU transport family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N1H1_9CLOT
RbsD/FucU transport family protein {ECO:0000313|EMBL:EJF40589.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
RbsD or FucU transporter
L3_063_052G1_scaffold_80_30
unknown

Not on your lists

27749..28054
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying items 1-30 of 152 in total

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