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L3_063_052G1_scaffold_86

Search features with annotation key words

Displaying items 1-30 of 144 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_86_1
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(130..849)
DNA (720bp) protein (240aa)
Peptidase C26 n=1 Tax=Clostridium sp. CAG:221 RepID=R6G0P7_9CLOT
Peptidase C26 {ECO:0000313|EMBL:CDB14926.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
peptidase C26
L3_063_052G1_scaffold_86_2
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(980..3592)
DNA (2613bp) protein (871aa)
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase (Acetylating) n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJF2_CELLD
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_86_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3950..4510
DNA (561bp) protein (187aa)
Maltose O-acetyltransferase {ECO:0000313|EMBL:EOD00454.1}; EC=2.3.1.79 {ECO:0000313|EMBL:EOD00454.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Maltose O-acetyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUY1_9CLOT
transferase
L3_063_052G1_scaffold_86_4
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4977..6251
DNA (1275bp) protein (425aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Serine--tRNA ligase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQ34_CELLD
L3_063_052G1_scaffold_86_5
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6310..6741)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I4A0I6_ORNRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL97470.1}; TaxID=867902 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ornithobacterium.;" source="Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG; 23171 / LMG 9086).;"
L3_063_052G1_scaffold_86_6
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6843..7181
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NY98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ08778.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
L3_063_052G1_scaffold_86_7
unknown

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7184..7546
DNA (363bp) protein (121aa)

This feature has no annotations

L3_063_052G1_scaffold_86_8
Clostridium sp. CAG:433, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7561..7917
DNA (357bp) protein (119aa)
TM2 domain containing protein n=1 Tax=Clostridium sp. CAG:433 RepID=R6YFM7_9CLOT
TM2 domain containing protein {ECO:0000313|EMBL:CDD30129.1}; TaxID=1262806 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:433.;"
TM2 domain-containing protein
L3_063_052G1_scaffold_86_9
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8009..9280)
DNA (1272bp) protein (424aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ADZ82588.1}; EC=3.4.16.4 {ECO:0000313|EMBL:ADZ82588.1};; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQ40_CELLD
L3_063_052G1_scaffold_86_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9296..9583)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6P6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96909.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative transcriptional regulator
L3_063_052G1_scaffold_86_11
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9763..10401
DNA (639bp) protein (213aa)
Regulatory protein TetR n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQ41_CELLD
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADZ82589.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_86_12
unknown

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comp(10467..10700)
DNA (234bp) protein (78aa)

This feature has no annotations

L3_063_052G1_scaffold_86_13
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11115..12329)
DNA (1215bp) protein (405aa)
Integrase family protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQ46_CELLD
integrase
Integrase family protein {ECO:0000313|EMBL:ADZ82594.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_86_14

Not on your lists

comp(12449..13498)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Treponema bryantii RepID=UPI0003B78632
Uncharacterized protein {ECO:0000313|EMBL:ETJ38650.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_063_052G1_scaffold_86_15
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(14083..14727)
DNA (645bp) protein (215aa)
Putative DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R287_9FIRM
Putative DNA-binding protein {ECO:0000313|EMBL:CCZ34778.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_063_052G1_scaffold_86_16
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14876..15073
DNA (198bp) protein (66aa)
Helix-turn-helix domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJ41_CELLD
hypothetical protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADZ83200.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_86_17
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15410..15643
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQ50_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ82598.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_86_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15658..16461
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CW75_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17028.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_063_052G1_scaffold_86_19
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16442..17254
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQ52_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ82600.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_86_20
unknown

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17282..17392
DNA (111bp) protein (37aa)

This feature has no annotations

L3_063_052G1_scaffold_86_21
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17406..18227
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQ53_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ82601.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_86_22
unknown

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18241..18543
DNA (303bp) protein (101aa)

This feature has no annotations

L3_063_052G1_scaffold_86_23
unknown

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18598..18798
DNA (201bp) protein (67aa)

This feature has no annotations

L3_063_052G1_scaffold_86_24
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18801..19124
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RQ19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49790.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Domain of unknown function (DUF955).
L3_063_052G1_scaffold_86_25
unknown

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19312..19455
DNA (144bp) protein (48aa)

This feature has no annotations

L3_063_052G1_scaffold_86_26
unknown

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19680..20402
DNA (723bp) protein (241aa)

This feature has no annotations

L3_063_052G1_scaffold_86_27
unknown

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20409..20594
DNA (186bp) protein (62aa)

This feature has no annotations

L3_063_052G1_scaffold_86_28
Clostridium sp. CAG:967, Melainabacteria, Bacteria

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21691..22611
DNA (921bp) protein (307aa)
ATP-binding region ATPase-like protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5KP33_9CLOT
ATP-binding region ATPase-like protein {ECO:0000313|EMBL:CCY62891.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
hypothetical protein
L3_063_052G1_scaffold_86_29
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22608..23846
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EQH5_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68023.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_063_052G1_scaffold_86_30
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23843..24142
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) RepID=D1B345_SULD5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68024.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Displaying items 1-30 of 144 in total

View Taxonomy