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L3_063_052G1_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_124_1
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..784)
DNA (783bp) protein (261aa)
Putative dNA primase small subunit n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VH83_CLOBI
Putative dNA primase small subunit {ECO:0000313|EMBL:EQK40106.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
replication protein
L3_063_052G1_scaffold_124_2
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1934..3250
DNA (1317bp) protein (439aa)
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VKI6_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48978.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
sig2; RNA polymerase sigma factor
L3_063_052G1_scaffold_124_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3462..5786
DNA (2325bp) protein (775aa)
Actinobacterial surface-anchored domain protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0CUA7_CLOSO
Neutral protease A {ECO:0000313|EMBL:CEN22413.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_063_052G1_scaffold_124_4
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6032..6247
DNA (216bp) protein (72aa)
Helix-turn-helix family protein n=2 Tax=Clostridium sordellii RepID=T0CWQ2_CLOSO
XRE family transcriptional regulator {ECO:0000313|EMBL:KGJ48979.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_052G1_scaffold_124_5
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6240..7034
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CVA8_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:KGJ48980.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_052G1_scaffold_124_6
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7136..7390
DNA (255bp) protein (85aa)
Putative membrane protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VDS7_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48981.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_063_052G1_scaffold_124_7
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7457..9073)
DNA (1617bp) protein (539aa)
Integral membrane protein MviN n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VG36_CLOBI
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
virulence factor MviN
L3_063_052G1_scaffold_124_8
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9335..9937)
DNA (603bp) protein (201aa)
Resolvase, N terminal domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4V7D4_CLOBI
DNA recombinase {ECO:0000313|EMBL:KGJ48983.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
site-specific recombinase, DNA invertase Pin
L3_063_052G1_scaffold_124_9
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10737..12152
DNA (1416bp) protein (472aa)
Na+/H+ antiporter NhaC n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VKL2_CLOBI
Sodium:proton antiporter {ECO:0000313|EMBL:KGJ48988.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
putative Na+/H+ antiporter, NhaC family
L3_063_052G1_scaffold_124_10
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12208..12474
DNA (267bp) protein (89aa)
Putative membrane protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VJG5_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48989.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
putative membrane protein
L3_063_052G1_scaffold_124_11
unknown

Not on your lists

comp(12853..13146)
DNA (294bp) protein (98aa)

This feature has no annotations

L3_063_052G1_scaffold_124_12
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13530..13955
DNA (426bp) protein (142aa)
Putative lipoprotein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VFU0_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48991.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_063_052G1_scaffold_124_13
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14019..14531
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEQ5_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK39605.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
hypothetical protein
L3_063_052G1_scaffold_124_14
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14849..15340)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CVR5_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:KGJ48997.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_063_052G1_scaffold_124_15
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15871..17283
DNA (1413bp) protein (471aa)
Calcineurin-like phosphoesterase family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VDQ2_CLOBI
Nucleotidase {ECO:0000313|EMBL:KGJ48998.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
membrane-associated nucleotidase
L3_063_052G1_scaffold_124_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17566..17985)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000379F11B
Uncharacterized protein {ECO:0000313|EMBL:EHJ26491.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_063_052G1_scaffold_124_17
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18293..18589
DNA (297bp) protein (99aa)
Putative membrane protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CQ35_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:KGJ49000.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_063_052G1_scaffold_124_18
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18728..18982
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ49001.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_063_052G1_scaffold_124_19
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19052..19612)
DNA (561bp) protein (187aa)
Putative lipoprotein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEP1_CLOBI
Putative lipoprotein {ECO:0000313|EMBL:EQK39600.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
L3_063_052G1_scaffold_124_20
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19818..20327)
DNA (510bp) protein (170aa)
VanZ-related protein n=2 Tax=Clostridium kluyveri RepID=A5N5G9_CLOK5
VanZ family protein {ECO:0000313|EMBL:KGJ49002.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
VanZ-like protein
L3_063_052G1_scaffold_124_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20616..21230)
DNA (615bp) protein (205aa)
Bacterial regulatory s, tetR family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DGM6_CLODI
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EQF27089.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
transcriptional regulator
L3_063_052G1_scaffold_124_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21499..22146
DNA (648bp) protein (216aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=C9XJ81_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30050.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_063_052G1_scaffold_124_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22236..22895
DNA (660bp) protein (220aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=C9XJ81_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE01997.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_063_052G1_scaffold_124_24
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23836..24318
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI0003658C86
Membrane protein {ECO:0000313|EMBL:KGJ49003.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
membrane protein
L3_063_052G1_scaffold_124_25
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24332..24553
DNA (222bp) protein (74aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=D5Q3S5_CLODI
XRE family transcriptional regulator {ECO:0000313|EMBL:KGJ49004.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
transcriptional regulator
L3_063_052G1_scaffold_124_26
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24714..26378)
DNA (1665bp) protein (555aa)
Hydrolase CocE/NonD family protein n=1 Tax=Bacillus cereus HuA3-9 RepID=R8CK36_BACCE
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:EOO11976.1}; TaxID=1053205 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus HuA3-9.;"
hypothetical protein
L3_063_052G1_scaffold_124_27
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26753..27328
DNA (576bp) protein (192aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MDF2_9CLOT
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGF55954.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_063_052G1_scaffold_124_28
unknown

Not on your lists

27695..27784
DNA (90bp) protein (30aa)

This feature has no annotations

L3_063_052G1_scaffold_124_29
Enterococcus phoeniculicola, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27964..29736)
DNA (1773bp) protein (591aa)
multidrug resistance ABC transporter ATP-binding protein/permease (EC:3.6.3.44)
Uncharacterized protein n=1 Tax=Enterococcus phoeniculicola ATCC BAA-412 RepID=R3TGN6_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOL40599.1}; TaxID=1158610 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus phoeniculicola ATCC BAA-412.;"
L3_063_052G1_scaffold_124_30
Enterococcus phoeniculicola, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29736..30332)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Enterococcus phoeniculicola ATCC BAA-412 RepID=R3WFD0_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOL40600.1}; TaxID=1158610 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus phoeniculicola ATCC BAA-412.;"
transcriptional regulator
Displaying items 1-30 of 125 in total

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