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L3_063_052G1_scaffold_127

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_127_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(136..2508)
DNA (2373bp) protein (791aa)
glgP; glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Phosphorylase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMW4_CLOP1
L3_063_052G1_scaffold_127_2
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2505..3986)
DNA (1482bp) protein (494aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
4-alpha-glucanotransferase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIP8_CELLD
L3_063_052G1_scaffold_127_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3991..5016)
DNA (1026bp) protein (342aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF62_CLOPF
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDT27486.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
malR; LacI family transcriptional regulator
L3_063_052G1_scaffold_127_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5023..5916)
DNA (894bp) protein (298aa)
Putative maltose/maltodextrin ABC transporter, permease protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQJ9_CLOPF
maltose ABC transporter
Putative maltose/maltodextrin ABC transporter, permease protein {ECO:0000313|EMBL:EDT15965.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_063_052G1_scaffold_127_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5918..6862)
DNA (945bp) protein (315aa)
Maltose ABC transporter permease n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CE40_9CLOT
Maltose ABC transporter permease {ECO:0000313|EMBL:EOR27538.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
maltose ABC transporter
L3_063_052G1_scaffold_127_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7481..8776)
DNA (1296bp) protein (432aa)
Putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V424_CLOPF
maltose/maltodextrin ABC transporter maltose/maltodextrin-binding protein
Putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein {ECO:0000313|EMBL:EDT71463.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_063_052G1_scaffold_127_7
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8837..10378)
DNA (1542bp) protein (514aa)
1,4-alpha-D-glucan glucanohydrolase (EC:3.2.1.1)
Alpha amylase, catalytic domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CQ09_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:ERI92599.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L3_063_052G1_scaffold_127_8
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10613..11806)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036B5B48
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAF59110.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
L3_063_052G1_scaffold_127_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11793..16907)
DNA (5115bp) protein (1705aa)
Fibronectin type III domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NTE6_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:EDN00708.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
fibronectin type III domain protein
L3_063_052G1_scaffold_127_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17147..18010)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1T1_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:KJU72237.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
cupin domain protein
L3_063_052G1_scaffold_127_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18169..19929
DNA (1761bp) protein (587aa)
ABC transporter n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFV4_9CLOT
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY84202.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_063_052G1_scaffold_127_12
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19930..21708
DNA (1779bp) protein (593aa)
ABC transporter transmembrane region n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SKZ9_CLOC7
ABC transporter
ABC transporter transmembrane region {ECO:0000313|EMBL:ADL53571.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_063_052G1_scaffold_127_13
unknown

Not on your lists

22153..22635
DNA (483bp) protein (161aa)

This feature has no annotations

L3_063_052G1_scaffold_127_14
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22751..23605)
DNA (855bp) protein (285aa)
AAA ATPase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LVZ9_CLOB8
ATPase AAA {ECO:0000313|EMBL:KEZ88050.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
ATPase AAA
L3_063_052G1_scaffold_127_15
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24195..24695)
DNA (501bp) protein (167aa)
Topology modulation protein n=2 Tax=Turicibacter RepID=F0HBS6_9FIRM
Putative topology modulation protein {ECO:0000313|EMBL:EFF65206.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
topology modulation protein
L3_063_052G1_scaffold_127_16
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24916..25947
DNA (1032bp) protein (344aa)
helix-turn-helix domain-containing protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289D48E
Helix-turn-helix family protein {ECO:0000313|EMBL:KFM94411.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
hypothetical protein
L3_063_052G1_scaffold_127_17
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26108..27487)
DNA (1380bp) protein (460aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IZK0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EOS27231.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
putative efflux protein, MATE family
L3_063_052G1_scaffold_127_18
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27564..28502)
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FZC2_9FIRM
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L3_063_052G1_scaffold_127_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28572..28976)
DNA (405bp) protein (135aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Clostridium difficile 70-100-2010 RepID=G6BV47_CLODI
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EHJ31190.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
cytidine/deoxycytidylate deaminase family protein
L3_063_052G1_scaffold_127_20
Lactobacillus spicheri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29029..29430)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00036A4466
MerR family transcriptional regulator {ECO:0000313|EMBL:KJW12800.1}; TaxID=216463 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus spicheri.;"
MerR family transcriptional regulator
L3_063_052G1_scaffold_127_21
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29548..30717
DNA (1170bp) protein (390aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EDS11921.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EDS11921.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Alcohol dehydrogenase, iron-dependent n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P952_9FIRM
alcohol dehydrogenase
L3_063_052G1_scaffold_127_22
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30781..31293)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1R7_CLOCD
Uncharacterized protein {ECO:0000313|EMBL:GAE87572.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
hypothetical protein
L3_063_052G1_scaffold_127_23
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31296..31616)
DNA (321bp) protein (107aa)
Putative transcriptional regulator n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WHV3_DESOD
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AET69665.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L3_063_052G1_scaffold_127_24
unknown

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comp(31727..32200)
DNA (474bp) protein (158aa)

This feature has no annotations

L3_063_052G1_scaffold_127_25
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32238..33362)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W387_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48593.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_052G1_scaffold_127_26
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33462..35117)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LA65_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EOS55669.1}; TaxID=1235795 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
G-D-S-L family lipolytic protein
L3_063_052G1_scaffold_127_27
Xenorhabdus cabanillasii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35148..36041)
DNA (894bp) protein (298aa)
Uncharacterized protein {ECO:0000313|EMBL:CDL79497.1}; TaxID=1427517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus cabanillasii JM26.;"
L3_063_052G1_scaffold_127_28
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36544..36663
DNA (120bp) protein (40aa)
Insertion element protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FW64_9FIRM
Insertion element protein {ECO:0000313|EMBL:EEA86234.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
transposase
L3_063_052G1_scaffold_127_29
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36937..37185
DNA (249bp) protein (83aa)
HTH/TPR domain-containing protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SQ11_9CLOT
HTH/TPR domain-containing protein {ECO:0000313|EMBL:CDC63348.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
L3_063_052G1_scaffold_127_30
Bacillus subterraneus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(37389..37946)
DNA (558bp) protein (186aa)
Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) RepID=Q8ESZ4_OCEIH
Uncharacterized protein {ECO:0000313|EMBL:KIY22047.1}; TaxID=285983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subterraneus.;"
hypothetical protein
Displaying items 1-30 of 76 in total

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