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L3_063_052G1_scaffold_132

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_132_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..497)
DNA (495bp) protein (165aa)
BadF/BadG/BcrA/BcrD ATPase family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QM16_9CLOT
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:EKY28612.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
BadF/BadG/BcrA/BcrD type ATPase
L3_063_052G1_scaffold_132_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(512..1627)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96648.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_063_052G1_scaffold_132_3
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1615..2874)
DNA (1260bp) protein (420aa)
PTS system, lactose/cellobiose-specific IIC component n=2 Tax=Erysipelothrix rhusiopathiae RepID=F5WTW8_ERYRF
PTS system lactose/cellobiose-specific transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae (strain Fujisawa).;"
L3_063_052G1_scaffold_132_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2875..4029)
DNA (1155bp) protein (385aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKW2_9CLOT
anmK; anhydro-N-acetylmuramic acid kinase
L3_063_052G1_scaffold_132_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4085..4984)
DNA (900bp) protein (300aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
murQ; N-acetylmuramic acid 6-phosphate etherase MurQ (EC:4.2.1.126)
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBK7_9FIRM
L3_063_052G1_scaffold_132_6
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5027..6061)
DNA (1035bp) protein (345aa)
membrane protein n=1 Tax=Erysipelothrix tonsillarum RepID=UPI000374BBB7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK31905.1}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae (strain Fujisawa).;"
L3_063_052G1_scaffold_132_7
Lactobacillus shenzhenensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6074..7360)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Lactobacillus shenzhenensis LY-73 RepID=U4TZI5_9LACO
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1231336 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus shenzhenensis LY-73.;"
PTS system lactose/cellobiose-specific transporter subunit IIC
L3_063_052G1_scaffold_132_8
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

comp(7530..8582)
DNA (1053bp) protein (351aa)
Beta-lactamase family protein n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XEE5_9FIRM
Beta-lactamase family protein {ECO:0000313|EMBL:CDD21983.1}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
beta-lactamase family protein
L3_063_052G1_scaffold_132_9
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8706..8924
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Erysipelothrix tonsillarum RepID=UPI00037BF49D
Uncharacterized protein {ECO:0000313|EMBL:EFY09593.1}; TaxID=525280 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae ATCC 19414.;"
hypothetical protein
L3_063_052G1_scaffold_132_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9000..9254)
DNA (255bp) protein (85aa)
Putative Transcriptional regulator, RpiR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EWZ4_9CLOT
Putative Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CDG00751.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
RpiR family phosphosugar-binding transcriptional regulator
L3_063_052G1_scaffold_132_11
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9202..9813)
DNA (612bp) protein (204aa)
transcriptional regulator n=1 Tax=Erysipelothrix tonsillarum RepID=UPI0003703E5E
Putative Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CDG00751.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
RpiR family phosphosugar-binding transcriptional regulator
L3_063_052G1_scaffold_132_12
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9897..10919)
DNA (1023bp) protein (341aa)
Sodium/proton antiporter, CPA1 family (TC 2.A.36) n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QPG8_ACEAZ
sodium/proton antiporter
Sodium/proton antiporter, CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:ADL12409.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
L3_063_052G1_scaffold_132_13
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11077..11979)
DNA (903bp) protein (301aa)
Cation efflux family protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G629_9CLOT
Cation efflux family protein {ECO:0000313|EMBL:CDB16964.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
cation efflux family protein
L3_063_052G1_scaffold_132_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12164..12898)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96625.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_063_052G1_scaffold_132_15
unknown

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13018..13317
DNA (300bp) protein (100aa)

This feature has no annotations

L3_063_052G1_scaffold_132_16
unknown

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13463..13789
DNA (327bp) protein (109aa)

This feature has no annotations

L3_063_052G1_scaffold_132_17
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13888..15018)
DNA (1131bp) protein (377aa)
Putative chlorophyll synthesis pathway protein BchC n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XUS0_DESHA
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EHL04642.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
hypothetical protein
L3_063_052G1_scaffold_132_18
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(15485..16219)
DNA (735bp) protein (245aa)
rRNA adenine N-6-methyltransferase n=2 Tax=Bacilli RepID=ERMG_LYSSH
ermG; rRNA adenine N-6-methyltransferase
rRNA adenine N-6-methyltransferase {ECO:0000313|EMBL:AFC63677.1}; TaxID=1155766 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium (strain Aus0004).;"
L3_063_052G1_scaffold_132_19
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16348..17007)
DNA (660bp) protein (220aa)
hexapeptide repeat-containing acetyltransferase (EC:2.3.1.-)
Hexapeptide repeat-containing acetyltransferase {ECO:0000313|EMBL:AFC63678.1}; EC=2.3.1.- {ECO:0000313|EMBL:AFC63678.1};; TaxID=1155766 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium (strain Aus0004).;"
Hexapeptide repeat-containing acetyltransferase n=1 Tax=Enterococcus faecium (strain Aus0004) RepID=H8L7S3_ENTFU
L3_063_052G1_scaffold_132_20
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17043..17576)
DNA (534bp) protein (178aa)
Glutamate rich protein GrpB n=3 Tax=Bacteroides RepID=E5VDI4_9BACE
Glutamate rich protein GrpB {ECO:0000313|EMBL:EFV25105.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_063_052G1_scaffold_132_21
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17694..19157)
DNA (1464bp) protein (488aa)
ABC transporter n=4 Tax=Bacteria RepID=E5VDI5_9BACE
ABC transporter {ECO:0000313|EMBL:EFV25106.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
ABC transporter
L3_063_052G1_scaffold_132_22
Streptococcus pyogenes, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19271..20410)
DNA (1140bp) protein (380aa)
Macrolide-efflux protein n=3 Tax=Streptococcus RepID=B5ARC7_STRPY
Macrolide-efflux protein {ECO:0000313|EMBL:ACG58974.1}; TaxID=1314 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pyogenes.;"
macrolide-efflux protein
L3_063_052G1_scaffold_132_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20927..22498)
DNA (1572bp) protein (524aa)
DNA recombinase, putative n=1 Tax=Bacillus cereus (strain ATCC 10987) RepID=Q73ED9_BACC1
Uncharacterized protein {ECO:0000313|EMBL:KJZ83585.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Site-specific recombinase
L3_063_052G1_scaffold_132_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22502..22915)
DNA (414bp) protein (138aa)
Recombinase n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I7N8_CLOCE
Uncharacterized protein {ECO:0000313|EMBL:KJZ97229.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
recombinase
L3_063_052G1_scaffold_132_25
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22916..24508)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5N0I8_CLOK5
Uncharacterized protein {ECO:0000313|EMBL:KJZ94589.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L3_063_052G1_scaffold_132_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24534..24764)
DNA (231bp) protein (77aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=B0K6T8_THEPX
Uncharacterized protein {ECO:0000313|EMBL:KJZ97228.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_063_052G1_scaffold_132_27
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24900..25601)
DNA (702bp) protein (234aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase family protein n=3 Tax=Clostridium difficile RepID=T3T793_CLODI
N-acetylmuramoyl-L-alanine amidase domain protein {ECO:0000313|EMBL:KJZ94598.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
L3_063_052G1_scaffold_132_28
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25601..26008)
DNA (408bp) protein (136aa)
Toxin secretion/phage lysis holin family protein n=3 Tax=Clostridium difficile RepID=T3T4G9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KJZ97227.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
toxin secretion/phage lysis holin
L3_063_052G1_scaffold_132_29
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26087..28528)
DNA (2442bp) protein (814aa)
glycosyl hydrolase-like protein (EC:3.2.1.-)
Glycosyl hydrolases 18 family protein n=3 Tax=Clostridium difficile RepID=T3T525_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KJZ94571.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
L3_063_052G1_scaffold_132_30
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28555..29136)
DNA (582bp) protein (194aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=T3T3D3_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67852.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Displaying items 1-30 of 93 in total

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