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L3_063_052G1_scaffold_137

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_137_1
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..3652)
DNA (3651bp) protein (1217aa)
Conserved repeat domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VQN9_CLOBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68243.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_063_052G1_scaffold_137_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4022..4462
DNA (441bp) protein (147aa)
Putative lipoprotein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VX03_CLOBI
Putative lipoprotein {ECO:0000313|EMBL:EQK45958.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
L3_063_052G1_scaffold_137_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4545..5501)
DNA (957bp) protein (319aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CEQ10462.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
dTDP-glucose 4,6-dehydratase n=21 Tax=Clostridium difficile RepID=T2TRM1_CLODI
dtdp-glucose 4,6-dehydratase
L3_063_052G1_scaffold_137_4
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5660..6133
DNA (474bp) protein (158aa)
VanZ family protein n=1 Tax=Bacillus thuringiensis serovar israelensis ATCC 35646 RepID=Q3EWM7_BACTI
VanZ family protein {ECO:0000313|EMBL:EAO55721.1}; TaxID=339854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis serovar israelensis ATCC 35646.;"
VanZ family protein
L3_063_052G1_scaffold_137_5
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6197..7729)
DNA (1533bp) protein (511aa)
Integral membrane protein MviN n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSJ8_CLOBI
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
virulence factor MviN
L3_063_052G1_scaffold_137_6
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7717..9057)
DNA (1341bp) protein (447aa)
Putative membrane protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VQ88_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ50159.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
extrracellular polysaccharide polymerase putative
L3_063_052G1_scaffold_137_7
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9073..10047)
DNA (975bp) protein (325aa)
Polysaccharide biosynthesis family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VIX6_CLOBI
Vi polysaccharide biosynthesis protein VipB/TviC {ECO:0000313|EMBL:KGJ50160.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
NAD dependent epimerase
L3_063_052G1_scaffold_137_8
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10050..11390)
DNA (1341bp) protein (447aa)
putative UDP-glucose/GDP-mannose dehydrogenase (EC:1.1.1.22 1.1.1.132)
Nucleotide sugar dehydrogenase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VRC8_CLOBI
UDP-N-acetyl-D-galactosamine dehydrogenase {ECO:0000313|EMBL:KGJ50161.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_063_052G1_scaffold_137_9
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11411..11956)
DNA (546bp) protein (182aa)
Bacterial transferase hexapeptide family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSC5_CLOBI
Bacterial transferase hexapeptide family protein {ECO:0000313|EMBL:EQK43656.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hexapaptide repeat-containing transferase
L3_063_052G1_scaffold_137_10
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11987..13138)
DNA (1152bp) protein (384aa)
Glycosyl transferases group 1 family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSK3_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ50162.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_052G1_scaffold_137_11
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13160..14266)
DNA (1107bp) protein (369aa)
Glycosyl transferases group 1 family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VQ94_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ50163.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
group 1 glycosyl transferase
L3_063_052G1_scaffold_137_12
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14277..15410)
DNA (1134bp) protein (378aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VIY1_CLOBI
Aminotransferase DegT {ECO:0000313|EMBL:KGJ50164.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
beta-eliminating lyase family protein
L3_063_052G1_scaffold_137_13
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15359..16048)
DNA (690bp) protein (230aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VRD2_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ50165.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
transferase
L3_063_052G1_scaffold_137_14
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16060..16662)
DNA (603bp) protein (201aa)
Bacterial sugar transferase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSC9_CLOBI
Sugar transferase {ECO:0000313|EMBL:KGJ50166.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
UDP-galactose phosphate transferase
L3_063_052G1_scaffold_137_15
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16681..18588)
DNA (1908bp) protein (636aa)
Oxidoreductase , NAD-binding Rossmann fold family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSK6_CLOBI
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KGJ50167.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
polysaccharide biosynthesis protein
L3_063_052G1_scaffold_137_16
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18627..19253)
DNA (627bp) protein (209aa)
Chain length determinant family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VQ99_CLOBI
Chain length determinant family protein {ECO:0000313|EMBL:EQK43663.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
ywqC3; capsular polysaccharide biosynthesis protein YwqC
L3_063_052G1_scaffold_137_17
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19553..19951
DNA (399bp) protein (133aa)
Nucleotidyltransferase domain protein n=97 Tax=Clostridium difficile RepID=G6BYN6_CLODI
Nucleotidyltransferase {ECO:0000313|EMBL:KGJ50168.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_052G1_scaffold_137_18
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20054..20506)
DNA (453bp) protein (151aa)
VanZ like family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E5E9_CLOSO
Phosphotransbutyrylase {ECO:0000313|EMBL:CEN96052.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
VanZ family protein
L3_063_052G1_scaffold_137_19
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20762..21676)
DNA (915bp) protein (305aa)
Beta-glycosyltransferase n=1 Tax=Geobacillus sp. MAS1 RepID=V6VN40_9BACI
Beta-glycosyltransferase {ECO:0000313|EMBL:CEP47888.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
glycosyltransferases involved in cell wall biogenesis
L3_063_052G1_scaffold_137_20
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22056..23036)
DNA (981bp) protein (327aa)
Cell envelope-related function transcriptional attenuator common domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VY83_CLOBI
Cell envelope-related function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EQK45806.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
intron RNA domain IV
L3_063_052G1_scaffold_137_21
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23063..23989)
DNA (927bp) protein (309aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VYN7_CLOBI
gtaB; UTP--glucose-1-phosphate uridylyltransferase
L3_063_052G1_scaffold_137_22
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24065..25231)
DNA (1167bp) protein (389aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VYT9_CLOBI
Nucleotide sugar dehydrogenase family protein {ECO:0000313|EMBL:EQK46011.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
L3_063_052G1_scaffold_137_23
Erwinia typographi, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25326..26525)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002DF1844
Uncharacterized protein {ECO:0000313|EMBL:KGT95836.1}; TaxID=371042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia typographi.;"
group 1 glycosyl transferase
L3_063_052G1_scaffold_137_24
Enterococcus saccharolyticus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26587..27138)
DNA (552bp) protein (184aa)
maa; maltose O-acetyltransferase (EC:2.3.1.79)
Uncharacterized protein n=1 Tax=Enterococcus saccharolyticus ATCC 43076 RepID=S0NGI4_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOT30778.1}; TaxID=1139996 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus saccharolyticus ATCC 43076.;"
L3_063_052G1_scaffold_137_25
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27176..28378)
DNA (1203bp) protein (401aa)
Glycosyltransferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U672_9CLOT
Glycosyltransferase {ECO:0000313|EMBL:EKQ56662.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
glycosyltransferase
L3_063_052G1_scaffold_137_26
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28369..29616)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G6F9_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD71671.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L3_063_052G1_scaffold_137_27
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(29591..30718)
DNA (1128bp) protein (376aa)
Glycosyltransferase n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J2W0_MARPK
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AEX85651.1}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
L3_063_052G1_scaffold_137_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30762..31844)
DNA (1083bp) protein (361aa)
Glycosyl transferase, group 1 n=1 Tax=Clostridium perfringens F262 RepID=H7CST3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:KJZ83638.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Glycosyltransferase
L3_063_052G1_scaffold_137_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31869..32633)
DNA (765bp) protein (255aa)
tarA; putative N-acetylmannosaminyltransferase TarA (EC:2.4.1.187)
Putative N-acetylmannosaminyltransferase TarA {ECO:0000313|EMBL:AGX45195.1}; EC=2.4.1.187 {ECO:0000313|EMBL:AGX45195.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative N-acetylmannosaminyltransferase TarA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX70_CLOSA
L3_063_052G1_scaffold_137_30
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32647..33720)
DNA (1074bp) protein (358aa)
manC; putative mannose-1-phosphateguanylyltransferase (EC:2.7.7.22)
Nucleotidyl transferase family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D9T3_CLODI
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KGJ50433.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
Displaying items 1-30 of 84 in total

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