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L3_063_052G1_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_152_1
Enterococcus sp. C1, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1..546)
DNA (546bp) protein (182aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Enterococcus sp. C1 RepID=J0XPW7_9ENTE
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EJF50731.1}; TaxID=1182762 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus sp. C1.;"
clfB; clumping factor B
L3_063_052G1_scaffold_152_2
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1733..3091
DNA (1359bp) protein (453aa)
H+ symporter family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VMP0_CLOBI
Major facilitator transporter {ECO:0000313|EMBL:KGJ48557.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
amino acid/peptide transporter
L3_063_052G1_scaffold_152_3
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3295..4395
DNA (1101bp) protein (367aa)
AhpC/TSA family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VVV7_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48556.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
thioredoxin domain-containing protein
L3_063_052G1_scaffold_152_4
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4405..4542
DNA (138bp) protein (46aa)
Uncharacterized protein n=2 Tax=Clostridium bifermentans RepID=T4VKP1_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK45028.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
hypothetical protein
L3_063_052G1_scaffold_152_5
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4535..5365
DNA (831bp) protein (277aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VKD0_CLOBI
4Fe-4S binding domain protein {ECO:0000313|EMBL:EQK41231.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
4Fe-4S ferredoxin
L3_063_052G1_scaffold_152_6
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5484..6068
DNA (585bp) protein (195aa)
Helix-turn-helix family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VTV6_CLOBI
Helix-turn-helix family protein {ECO:0000313|EMBL:EQK44908.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
transcriptional regulator, XRE family
L3_063_052G1_scaffold_152_7
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6195..6491
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VIB7_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48553.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_052G1_scaffold_152_8
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6682..7350
DNA (669bp) protein (223aa)
Transcriptional regulatory family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VW29_CLOBI
Transcriptional regulatory family protein {ECO:0000313|EMBL:EQK44922.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
DNA-binding response regulator
L3_063_052G1_scaffold_152_9
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7529..9073
DNA (1545bp) protein (515aa)
Integral membrane protein MviN n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VKC6_CLOBI
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
virulence factor MviN
L3_063_052G1_scaffold_152_10
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9214..9978
DNA (765bp) protein (255aa)
ABC transporter family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VIB3_CLOBI
ABC transporter family protein {ECO:0000313|EMBL:EQK41223.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
bacitracin export ATP-binding protein BceA
L3_063_052G1_scaffold_152_11
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9965..11884
DNA (1920bp) protein (640aa)
FtsX-like permease family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VKN2_CLOBI
FtsX-like permease family protein {ECO:0000313|EMBL:EQK41222.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
ABC transporter permease
L3_063_052G1_scaffold_152_12
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11895..12395
DNA (501bp) protein (167aa)
Transglycosylase SLT domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VVL5_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48548.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_052G1_scaffold_152_13
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12500..12832
DNA (333bp) protein (111aa)
HxlR-like helix-turn-helix family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VJD9_CLOBI
HxlR family transcriptional regulator {ECO:0000313|EMBL:KGJ48547.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
transcriptional regulator
L3_063_052G1_scaffold_152_14
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12869..13792)
DNA (924bp) protein (308aa)
Putative membrane protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VV62_CLOBI
Putative membrane protein {ECO:0000313|EMBL:EQK45020.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
hypothetical protein
L3_063_052G1_scaffold_152_15
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13993..14343
DNA (351bp) protein (117aa)
Hydrogenase expression/synthesis hypA family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VUW9_CLOBI
Hydrogenase nickel incorporation protein HypA {ECO:0000313|EMBL:KGJ48545.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hydrogenase nickel incorporation protein HypA
L3_063_052G1_scaffold_152_16
unknown

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14512..14628
DNA (117bp) protein (39aa)

This feature has no annotations

L3_063_052G1_scaffold_152_17
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14632..15870
DNA (1239bp) protein (413aa)
Sensor histidine kinase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UTE6_CLOBO
Histidine kinase {ECO:0000313|EMBL:KGJ48544.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
sensor histidine kinase
L3_063_052G1_scaffold_152_18
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15882..16616
DNA (735bp) protein (245aa)
DNA-bindng response regulator, AraC family n=2 Tax=Clostridium botulinum B RepID=B2TLK9_CLOBB
Chemotaxis protein CheY {ECO:0000313|EMBL:KGJ48543.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
AraC family transcriptional regulator
L3_063_052G1_scaffold_152_19
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16913..18577
DNA (1665bp) protein (555aa)
Glycerol dehydratase large subunit n=2 Tax=Clostridium botulinum B RepID=B2TLK8_CLOBB
Propanediol dehydratase {ECO:0000313|EMBL:KGJ48542.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
glycerol dehydratase large subunit
L3_063_052G1_scaffold_152_20
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18594..19169
DNA (576bp) protein (192aa)
Propanediol utilization: dehydratase, medium subunit n=2 Tax=Clostridium botulinum B RepID=B2TLK7_CLOBB
Propanediol dehydratase {ECO:0000313|EMBL:KGJ48541.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
propanediol utilization: dehydratase, medium subunit
L3_063_052G1_scaffold_152_21
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19190..19612
DNA (423bp) protein (141aa)
Coenzyme B12-dependent glycerol dehydratase, small subunit n=2 Tax=Clostridium botulinum B RepID=B2TLK6_CLOBB
Glycerol dehydrogenase {ECO:0000313|EMBL:KGJ48540.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
coenzyme B12-dependent glycerol dehydratase, small subunit
L3_063_052G1_scaffold_152_22
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19641..21488
DNA (1848bp) protein (616aa)
glycerol dehydratase n=1 Tax=Clostridium botulinum RepID=UPI00031C7544
Glycerol dehydratase {ECO:0000313|EMBL:KGJ48539.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
glycerol dehydratase reactivation factor large subunit
L3_063_052G1_scaffold_152_23
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21478..21837
DNA (360bp) protein (120aa)
Glycerol dehydratase reactivation factor, small subunit n=2 Tax=Clostridium botulinum E RepID=B2V3H2_CLOBA
Glycerol dehydratase {ECO:0000313|EMBL:KGJ48538.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
glycerol dehydratase reactivation factor, small subunit
L3_063_052G1_scaffold_152_24
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21872..22297
DNA (426bp) protein (142aa)
DhaG protein n=2 Tax=Clostridium botulinum E RepID=B2V3H0_CLOBA
Uncharacterized protein {ECO:0000313|EMBL:KGJ48537.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
DhaG protein
L3_063_052G1_scaffold_152_25
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22346..23503
DNA (1158bp) protein (386aa)
dhaT; 1,3-propanediol dehydrogenase (EC:1.1.1.202)
1,3-propanediol dehydrogenase n=2 Tax=Clostridium botulinum E RepID=B2V3G9_CLOBA
1,3-propanediol dehydrogenase {ECO:0000313|EMBL:KGJ48536.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_063_052G1_scaffold_152_26
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23648..24358
DNA (711bp) protein (237aa)
glycerol transporter n=1 Tax=Clostridium botulinum RepID=UPI000305B0A0
Glycerol transporter {ECO:0000313|EMBL:KGJ48535.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
glycerol uptake facilitator protein
L3_063_052G1_scaffold_152_27
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24411..24881)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VUZ2_CLOBI
Cupin {ECO:0000313|EMBL:KGJ48534.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_052G1_scaffold_152_28
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25001..25549)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VKB8_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48533.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_052G1_scaffold_152_29
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25807..27888
DNA (2082bp) protein (694aa)
Methyl-accepting chemotaxis (MCP) signaling domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VJD5_CLOBI
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:EQK41215.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
methyl-accepting chemotaxis protein
L3_063_052G1_scaffold_152_30
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27929..28777)
DNA (849bp) protein (283aa)
Patatin-like phospholipase family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VV58_CLOBI
Patatin-like phospholipase family protein {ECO:0000313|EMBL:EQK45015.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
patatin
Displaying items 1-30 of 61 in total

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