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L3_063_052G1_scaffold_229

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_229_1
unknown

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160..504
DNA (345bp) protein (115aa)

This feature has no annotations

L3_063_052G1_scaffold_229_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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737..3055
DNA (2319bp) protein (773aa)
gshAB; bifunctional glutamate--cysteine ligase/glutathione synthetase (EC:6.3.2.2 6.3.2.3)
Glutathione biosynthesis bifunctional protein GshAB n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QCS4_9CLOT
Glutathione biosynthesis bifunctional protein GshAB {ECO:0000256|HAMAP-Rule:MF_00782}; Gamma-GCS-GS {ECO:0000256|HAMAP-Rule:MF_00782}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_063_052G1_scaffold_229_3
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3136..4101
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6GQ21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16272.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
alpha/beta hydrolase
L3_063_052G1_scaffold_229_4
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4173..5108)
DNA (936bp) protein (312aa)
Protein HflC n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RUZ8_9CLOT
HflC protein
Tax=BJP_IG2102_Clostridiales_34_350
L3_063_052G1_scaffold_229_5
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5098..6150)
DNA (1053bp) protein (351aa)
HflK protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YAP5_DICT6
hflK; HflK protein
Tax=BJP_IG2157_Clostridiales_35_16
L3_063_052G1_scaffold_229_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6340..6990
DNA (651bp) protein (217aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI0002D2B0E8
Transglycosylase {ECO:0000313|EMBL:EEQ59027.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L3_063_052G1_scaffold_229_7
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(6987..7472)
DNA (486bp) protein (162aa)
Putative membrane protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QT27_SPHPG
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AEV27932.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
L3_063_052G1_scaffold_229_8
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7605..7925
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JMX5_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ85890.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_229_9
unknown

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7984..8193
DNA (210bp) protein (70aa)

This feature has no annotations

L3_063_052G1_scaffold_229_10
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8316..11588
DNA (3273bp) protein (1091aa)
5'-nucleotidase (Fragment) n=2 Tax=Enterococcus faecalis RepID=R2VWQ4_ENTFL
5'-nucleotidase {ECO:0000313|EMBL:EOJ27324.1}; Flags: Fragment;; TaxID=1158671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0284.;"
LPXTG cell wall anchor domain protein
L3_063_052G1_scaffold_229_11
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11754..12290
DNA (537bp) protein (179aa)
Rubrerythrin n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPT6_CELLD
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:ADZ84871.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_229_12
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12440..13114
DNA (675bp) protein (225aa)
Two component transcriptional regulator winged helix family n=1 Tax=Clostridium sp. CAG:169 RepID=R6BCH1_9CLOT
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CDA61908.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_063_052G1_scaffold_229_13
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13170..14570
DNA (1401bp) protein (467aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
Signal transduction histidine kinase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FU91_9CLOT
signal transduction histidine kinase
L3_063_052G1_scaffold_229_14
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14670..15362
DNA (693bp) protein (231aa)
VTC domain-containing protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FJ59_9CLOT
VTC domain-containing protein {ECO:0000313|EMBL:EMS72130.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
VTC domain-containing protein
L3_063_052G1_scaffold_229_15
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15391..16062
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FJQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS72017.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
L3_063_052G1_scaffold_229_16
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16059..17828
DNA (1770bp) protein (590aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036D2B66
CotH protein
CotH protein {ECO:0000313|EMBL:CDM69042.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_063_052G1_scaffold_229_17
unknown

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17929..18222
DNA (294bp) protein (98aa)

This feature has no annotations

L3_063_052G1_scaffold_229_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18322..21396
DNA (3075bp) protein (1025aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLU0_CLOPF
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EDS79232.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
CoA-substrate-specific enzyme activase
L3_063_052G1_scaffold_229_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21383..22630
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XL48_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80900.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_229_20
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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23059..24804
DNA (1746bp) protein (582aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.6)
ATP-dependent metalloprotease FtsH {ECO:0000313|EMBL:ADZ83164.1}; EC=3.6.4.6 {ECO:0000313|EMBL:ADZ83164.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
ATP-dependent metalloprotease FtsH n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJ05_CELLD
L3_063_052G1_scaffold_229_21
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24838..25050)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJ06_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ83165.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_229_22
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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25274..25960
DNA (687bp) protein (229aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJ07_CELLD
transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADZ83166.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_229_23
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25957..27393
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJ08_CELLD
integral membrane sensor signal transduction histidine kinase
L3_063_052G1_scaffold_229_24
Bacillus nealsonii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(27472..27987)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bacillus nealsonii AAU1 RepID=R9BVY4_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EOR21212.1}; TaxID=1202533 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus nealsonii AAU1.;"
hypothetical protein
L3_063_052G1_scaffold_229_25
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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28290..28475
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJ10_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ83169.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_229_26
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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28496..29731
DNA (1236bp) protein (412aa)
Aminopeptidase II n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EB22_9FIRM
Aminopeptidase II {ECO:0000313|EMBL:ERI91647.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
peptidase M29 aminopeptidase II
L3_063_052G1_scaffold_229_27
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29883..30839
DNA (957bp) protein (319aa)
glyoxylate reductase (EC:1.1.1.26)
Glyoxylate reductase {ECO:0000313|EMBL:ADZ83172.1}; EC=1.1.1.26 {ECO:0000313|EMBL:ADZ83172.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Glyoxylate reductase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJ13_CELLD
L3_063_052G1_scaffold_229_28
unknown

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30931..31164
DNA (234bp) protein (78aa)
PREDICTED: disintegrin and metalloproteinase domain-containing protein 1b-like, partial n=2 Tax=Cricetulus griseus RepID=UPI00022F3F2C
L3_063_052G1_scaffold_229_29
Caldicellulosiruptor lactoaceticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

31272..32165
DNA (894bp) protein (298aa)
Alpha-L-glutamate ligase, RimK family n=1 Tax=Caldicellulosiruptor lactoaceticus 6A RepID=G2PUC1_9FIRM
RimK family alpha-L-glutamate ligase
Alpha-L-glutamate ligase, RimK family {ECO:0000313|EMBL:AEM73513.1}; TaxID=632516 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor lactoaceticus 6A.;"
L3_063_052G1_scaffold_229_30
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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32162..33031
DNA (870bp) protein (290aa)
Alpha-L-glutamate ligase, RimK family n=1 Tax=Caldicellulosiruptor lactoaceticus 6A RepID=G2PUC0_9FIRM
RimK family alpha-L-glutamate ligase {ECO:0000313|EMBL:CEE00781.1}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylovorans.;"
RimK family alpha-L-glutamate ligase
Displaying items 1-30 of 49 in total

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