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L3_063_052G1_scaffold_236

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_236_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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182..1429
DNA (1248bp) protein (416aa)
Helicase C-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ31_9FIRM
DEAD-like helicase {ECO:0000313|EMBL:ENZ14031.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
DNA methylase
L3_063_052G1_scaffold_236_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1431..2249
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGJ51596.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_063_052G1_scaffold_236_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2252..2590
DNA (339bp) protein (113aa)
Bacterial mobilisation protein (MobC) n=11 Tax=root RepID=D4JTZ7_9FIRM
Bacterial mobilisation protein (MobC).
Uncharacterized protein {ECO:0000313|EMBL:EHL75038.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_063_052G1_scaffold_236_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2742..3044
DNA (303bp) protein (101aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=C0FUM3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHL75037.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_063_052G1_scaffold_236_5
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3041..3340
DNA (300bp) protein (100aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=C0FUM4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95512.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_063_052G1_scaffold_236_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3415..4824)
DNA (1410bp) protein (470aa)
Divergent AAA domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ATF1_9CLOT
Divergent AAA domain protein {ECO:0000313|EMBL:EFC94902.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
putative transcriptional regulator
L3_063_052G1_scaffold_236_7
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4946..6361
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP10378.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
Relaxase/Mobilisation nuclease domain.
L3_063_052G1_scaffold_236_8
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6327..6626
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B874_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29554.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_063_052G1_scaffold_236_9
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6591..6959)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29553.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Helix-turn-helix.
L3_063_052G1_scaffold_236_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7114..8073
DNA (960bp) protein (320aa)
Transcriptional regulator, AraC family n=2 Tax=Firmicutes RepID=D4JY19_9FIRM
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CBK98918.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_052G1_scaffold_236_11
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8242..9195
DNA (954bp) protein (318aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=2 Tax=Firmicutes RepID=D4JY20_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Uncharacterized protein {ECO:0000313|EMBL:EHO29551.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_063_052G1_scaffold_236_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9192..10010
DNA (819bp) protein (273aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=2 Tax=Firmicutes RepID=D4JY21_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components {ECO:0000313|EMBL:CBK98920.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_052G1_scaffold_236_13
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10000..10779
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B869_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29549.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
ABC transporter
L3_063_052G1_scaffold_236_14
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10776..11588
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B868_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29548.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
ABC transporter
L3_063_052G1_scaffold_236_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11585..13243
DNA (1659bp) protein (553aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JY22_9FIRM
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:CBK98921.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ABC-type dipeptide transport system, periplasmic component
L3_063_052G1_scaffold_236_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13422..15212
DNA (1791bp) protein (597aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JY23_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBK98922.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_052G1_scaffold_236_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15206..16924
DNA (1719bp) protein (573aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JY24_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBK98923.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_052G1_scaffold_236_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16937..17524
DNA (588bp) protein (196aa)
Conserved hypothetical integral membrane protein TIGR02185 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JY25_9FIRM
conserved hypothetical integral membrane protein TIGR02185
Conserved hypothetical integral membrane protein TIGR02185 {ECO:0000313|EMBL:CBK98924.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_052G1_scaffold_236_19
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17632..17904
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B863_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29543.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Mn-dependent transcriptional regulator
L3_063_052G1_scaffold_236_20
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(17969..18298)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B862_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29542.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_063_052G1_scaffold_236_21
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18665..19213
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B861_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29541.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
sigma-70, region 4 family
L3_063_052G1_scaffold_236_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19206..19448
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B860_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98926.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_052G1_scaffold_236_23
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20125..20355
DNA (231bp) protein (77aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E2SKX4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFP61873.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
L3_063_052G1_scaffold_236_24
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20440..21657
DNA (1218bp) protein (406aa)
Site-specific recombinase, phage integrase family n=2 Tax=Firmicutes RepID=E2SKX3_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFP61872.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
integrase family protein
L3_063_052G1_scaffold_236_25

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21805..23016
DNA (1212bp) protein (404aa)
Putative uncharacterized protein n=2 Tax=root RepID=G5I7N0_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61913.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Site-specific recombinase XerD
L3_063_052G1_scaffold_236_26
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23290..23949)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X781_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ86727.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_063_052G1_scaffold_236_27
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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24189..25511
DNA (1323bp) protein (441aa)
Amidohydrolase family protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TAX3_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:CDC70523.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
amidohydrolase
L3_063_052G1_scaffold_236_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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25554..25934
DNA (381bp) protein (127aa)
TdcF protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGU3_9FIRM
TdcF protein {ECO:0000313|EMBL:EGJ45582.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
endoribonuclease L-PSP
L3_063_052G1_scaffold_236_29
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25989..27284
DNA (1296bp) protein (432aa)
Citrate transporter n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEG2_9FIRM
Citrate transporter {ECO:0000313|EMBL:EDS10351.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
citrate transporter
L3_063_052G1_scaffold_236_30
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27289..28518
DNA (1230bp) protein (410aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDS10352.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDS10352.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Aminotransferase, class I/II n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEG3_9FIRM
hypothetical protein
Displaying items 1-30 of 49 in total

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