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L3_063_052G1_scaffold_278

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_278_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..89)
DNA (87bp) protein (29aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CV45_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17399.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_278_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(220..1641)
DNA (1422bp) protein (474aa)
Spore germination protein AF n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGZ3_CLOPF
Spore germination protein AF {ECO:0000313|EMBL:EDT26741.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
spoVAF; stage V sporulation protein AF
L3_063_052G1_scaffold_278_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1866..3374)
DNA (1509bp) protein (503aa)
Putatve dicarboxylate transporter n=4 Tax=Clostridium perfringens RepID=Q0TRQ2_CLOP1
dicarboxylate transporter
Putatve dicarboxylate transporter {ECO:0000313|EMBL:EDT71933.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_063_052G1_scaffold_278_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3777..5648
DNA (1872bp) protein (624aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Sensory box histidine kinase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RN61_CLOPF
sensory box histidine kinase
L3_063_052G1_scaffold_278_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5872..6939
DNA (1068bp) protein (356aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CV49_CLOPF
hypothetical protein
Probable regulatory protein {ECO:0000313|EMBL:BAB80693.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_278_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6971..7651
DNA (681bp) protein (227aa)
sdhB; L-serine dehydratase, iron-sulfur-dependent subunit beta (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=5 Tax=Clostridium perfringens RepID=H7CV50_CLOPF
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EIA17404.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_278_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7655..8533
DNA (879bp) protein (293aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EDT13333.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDT13333.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
sdhA; L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=2 Tax=Clostridium perfringens RepID=B1BEG8_CLOPF
L3_063_052G1_scaffold_278_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8602..9336)
DNA (735bp) protein (245aa)
PP-loop family protein n=6 Tax=Clostridium perfringens RepID=Q0SU26_CLOPS
exoenzyme S synthesis protein B
PP-loop family protein {ECO:0000313|EMBL:ABG85775.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_063_052G1_scaffold_278_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9543..10289
DNA (747bp) protein (249aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=5 Tax=Clostridium perfringens RepID=H7CV53_CLOPF
L3_063_052G1_scaffold_278_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10356..11423)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XLP9_CLOPE
oxidoreductase, 2-nitropropane dioxygenase
Uncharacterized protein {ECO:0000313|EMBL:BAB80698.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_278_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11624..12334
DNA (711bp) protein (237aa)
Crp/FNR family transcriptional regulator n=8 Tax=Clostridium perfringens RepID=H7CV55_CLOPF
Crp/FNR family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EDT13332.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_063_052G1_scaffold_278_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12390..13301)
DNA (912bp) protein (304aa)
Radical SAM domain-containing protein n=2 Tax=Clostridium perfringens RepID=H7CV56_CLOPF
radical SAM domain-containing protein
Radical SAM domain-containing protein {ECO:0000313|EMBL:EIA17410.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_278_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13445..14422
DNA (978bp) protein (326aa)
Aminopeptidase n=3 Tax=Clostridium perfringens RepID=H7CV57_CLOPF
aminopeptidase
Aminopeptidase {ECO:0000313|EMBL:EIA17411.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_278_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14605..14796)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EKU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG01847.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
L3_063_052G1_scaffold_278_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14979..15728
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8J7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23453.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
prophage LambdaBa04
L3_063_052G1_scaffold_278_16
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15865..16458
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VF25_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK40103.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L3_063_052G1_scaffold_278_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16463..16792
DNA (330bp) protein (110aa)
Gp22 n=1 Tax=Clostridium phage PhiS63 RepID=I2E8X0_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KJU72458.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
gp2
L3_063_052G1_scaffold_278_18
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16994..20047
DNA (3054bp) protein (1018aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1L0Q0_CLOBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ11327.1}; TaxID=44251 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus (Paenibacillus azotofixans).;"
L3_063_052G1_scaffold_278_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20298..20462
DNA (165bp) protein (55aa)
Plasmid-related protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8K4_CLOPF
Plasmid-related protein {ECO:0000313|EMBL:EDT23432.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_063_052G1_scaffold_278_20
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20455..21456
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5RZH1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY77967.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
L3_063_052G1_scaffold_278_21
unknown

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22270..23748
DNA (1479bp) protein (493aa)

This feature has no annotations

L3_063_052G1_scaffold_278_22
unknown

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24246..24947
DNA (702bp) protein (234aa)

This feature has no annotations

L3_063_052G1_scaffold_278_23
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25211..25627
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AAR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85229.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hypothetical protein
L3_063_052G1_scaffold_278_24
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25740..26291
DNA (552bp) protein (184aa)
Small subunit of P27 family phage terminase n=3 Tax=Bacillus subtilis RepID=E9RJA7_BACNA
P27 family phage terminase small subunit,Phage terminase, small subunit,putative phage terminase, small subunit, P27 family,Phage terminase, small subunit {ECO:0000313|EMBL:CEK33574.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
terminase
L3_063_052G1_scaffold_278_25
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26300..28006
DNA (1707bp) protein (569aa)
Phage terminase large subunit n=2 Tax=Bacillus subtilis RepID=S5DQ44_BACIU
terminase
Phage terminase large subunit {ECO:0000313|EMBL:AGQ21265.1}; TaxID=535026 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis subsp. subtilis str. NCIB 3610.;"
L3_063_052G1_scaffold_278_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28024..29274
DNA (1251bp) protein (417aa)
Phage portal protein, HK97 family n=2 Tax=Clostridium butyricum RepID=B1QVM5_CLOBU
Phage portal protein, HK97 family {ECO:0000313|EMBL:EEP54304.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
portal protein
L3_063_052G1_scaffold_278_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29277..29897
DNA (621bp) protein (207aa)
Phage prohead protease, HK97 family n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5US60_CLOBO
Phage prohead protease, HK97 family {ECO:0000313|EMBL:EES48800.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
phage prohead protease
L3_063_052G1_scaffold_278_28
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29972..31138
DNA (1167bp) protein (389aa)
HK97 family phage major capsid protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AAQ6_9FIRM
Phage major capsid protein {ECO:0000313|EMBL:EOR27466.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L3_063_052G1_scaffold_278_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31230..31796
DNA (567bp) protein (189aa)
Phage major tail protein, Phi13 family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJ24_CLOPF
Phage major tail protein, Phi13 family {ECO:0000313|EMBL:EDT26046.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
phage major tail protein, phi13 family
L3_063_052G1_scaffold_278_30
unknown

Not on your lists

31854..32135
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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