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L3_063_052G1_scaffold_282

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_282_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(86..1483)
DNA (1398bp) protein (466aa)
aryl-phospho-beta-glucosidase (EC:3.2.1.86)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T9E6_9CLOT
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJU72699.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_063_052G1_scaffold_282_2
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1614..2300
DNA (687bp) protein (229aa)
GntR family transcriptional regulator n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G2K9_CLOPA
GntR family transcriptional regulator {ECO:0000313|EMBL:ETD70665.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
GntR family transcriptional regulator
L3_063_052G1_scaffold_282_3
unknown

Not on your lists

comp(2452..2637)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_063_052G1_scaffold_282_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2732..3235)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TW65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57020.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_063_052G1_scaffold_282_5

Not on your lists

comp(3228..4361)
DNA (1134bp) protein (378aa)
Membrane protein n=1 Tax=uncultured organism RepID=M1P0K2_9ZZZZ
Membrane protein {ECO:0000313|EMBL:AGF92881.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
L3_063_052G1_scaffold_282_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4546..6312)
DNA (1767bp) protein (589aa)
Xaa-Pro aminopeptidase 1 (EC:3.4.11.9)
Putative Xaa-Pro aminopeptidase 1 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENM7_9CLOT
Putative Xaa-Pro aminopeptidase 1 {ECO:0000313|EMBL:CDG02782.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
L3_063_052G1_scaffold_282_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6445..7293
DNA (849bp) protein (283aa)
LD-carboxypeptidase family protein {ECO:0000313|EMBL:ACD24527.1}; Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:CDH91414.1}; EC=3.4.17.13 {ECO:0000313|EMBL:CDH91414.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
LD-carboxypeptidase family protein n=2 Tax=Clostridium botulinum B RepID=B2TN89_CLOBB
LD-carboxypeptidase family protein
L3_063_052G1_scaffold_282_8
unknown

Not on your lists

comp(7335..8498)
DNA (1164bp) protein (388aa)

This feature has no annotations

L3_063_052G1_scaffold_282_9
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8518..9018)
DNA (501bp) protein (167aa)
Sigma-70 region 2 n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y7F3_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:ESL03586.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
RNA polymerase sigma factor, sigma-70 family
L3_063_052G1_scaffold_282_10
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9032..10264)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CB83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26567.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L3_063_052G1_scaffold_282_11
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10257..10829)
DNA (573bp) protein (191aa)
RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Bacillus RepID=C3AK16_BACMY
Uncharacterized protein {ECO:0000313|EMBL:KEZ88457.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
L3_063_052G1_scaffold_282_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11114..12376)
DNA (1263bp) protein (421aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q605_9CLOT
sensor histidine kinase
L3_063_052G1_scaffold_282_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12598..13857)
DNA (1260bp) protein (420aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q605_9CLOT
sensor histidine kinase
L3_063_052G1_scaffold_282_14
unknown

Not on your lists

comp(13879..14004)
DNA (126bp) protein (42aa)

This feature has no annotations

L3_063_052G1_scaffold_282_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14027..14581)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Y7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96978.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
accessory gene regulator B
L3_063_052G1_scaffold_282_16
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14870..16294)
DNA (1425bp) protein (475aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7R5_9FIRM
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EFW05836.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_063_052G1_scaffold_282_17
Paenibacillus sp. FSL R7-0331, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16311..18515)
DNA (2205bp) protein (735aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Enterococcus faecium PC4.1 RepID=D4VY36_ENTFC
glycosyl hydrolase family 3
Glycosyl hydrolase family 3 {ECO:0000313|EMBL:AIQ52107.1}; TaxID=1536773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0331.;"
L3_063_052G1_scaffold_282_18
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(18611..18919)
DNA (309bp) protein (103aa)
N%2CN'-diacetylchitobiose-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:CRH60493.1}; EC=2.7.1.- {ECO:0000313|EMBL:CRH60493.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
celC.2; PTS system cellobiose-specific transporter subunit IIA (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIA subunit n=2 Tax=Atopobium vaginae RepID=F1T5I7_9ACTN
L3_063_052G1_scaffold_282_19
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18953..20278)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G9U4_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
PTS system beta-glucoside-specific transporter subunit IIC
L3_063_052G1_scaffold_282_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20304..20609)
DNA (306bp) protein (102aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DA33_9CLOT
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EEG51811.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_063_052G1_scaffold_282_21
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20862..23645)
DNA (2784bp) protein (928aa)
PTS system transcriptional activator n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PVA3_9CLOT
PTS system transcriptional activator {ECO:0000313|EMBL:EET86833.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
PTS system transcriptional activator
L3_063_052G1_scaffold_282_22
alpha proteobacterium RS24, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23762..24541)
DNA (780bp) protein (260aa)
4-hydroxy-3-methylbut-2-enyl-diphosphate synthase protein {ECO:0000313|EMBL:ERL47062.1}; EC=1.17.7.1 {ECO:0000313|EMBL:ERL47062.1};; TaxID=1397666 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium RS24.;"
4-hydroxy-3-methylbut-2-enyl-diphosphate synthase protein n=1 Tax=alpha proteobacterium RS24 RepID=U2XPJ1_9PROT
response regulator receiver modulated metal dependent phosphohydrolase
L3_063_052G1_scaffold_282_23
Cyanobacterium aponinum, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24538..24894)
DNA (357bp) protein (119aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z8W5_CYAAP
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AFZ55040.1}; TaxID=755178 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium aponinum (strain PCC 10605).;"
L3_063_052G1_scaffold_282_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24928..27015)
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HER8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96724.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Signal transduction histidine kinase
L3_063_052G1_scaffold_282_25
RIFOXYB12_FULL_Sulfurimonas_35_9_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26999..28030)
DNA (1032bp) protein (344aa)
hisitdine kinase n=1 Tax=Geovibrio thiophilus RepID=UPI0003B43E3D
response regulator receiver modulated metal dependent phosphohydrolase
Tax=RIFOXYB12_FULL_Sulfurimonas_35_9_curated
L3_063_052G1_scaffold_282_26
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28316..29791
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C514_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72782.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L3_063_052G1_scaffold_282_27
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30197..31501
DNA (1305bp) protein (435aa)
MATE efflux family protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AYF6_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EMZ31468.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
MATE efflux family protein
L3_063_052G1_scaffold_282_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31801..32595
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YYW9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32655.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_063_052G1_scaffold_282_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32714..33460)
DNA (747bp) protein (249aa)
polysaccharide deacetylase n=1 Tax=Clostridium botulinum RepID=UPI0003700BD1
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:AIY79739.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
polysaccharide deacetylase family protein
L3_063_052G1_scaffold_282_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33650..34132)
DNA (483bp) protein (161aa)
NH2-acetyltransferase n=2 Tax=Clostridium butyricum RepID=B1R2B5_CLOBU
NH2-acetyltransferase {ECO:0000313|EMBL:EEP56440.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
NH2-acetyltransferase
Displaying items 1-30 of 75 in total

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