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L3_063_052G1_scaffold_298

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_298_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(420..1157)
DNA (738bp) protein (246aa)
Transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=B1QVW6_CLOBU
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EEP52685.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
transcriptional regulator, RpiR family
L3_063_052G1_scaffold_298_2
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(1332..2438)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003804A05
Putative NagC protein {ECO:0000313|EMBL:CDC93527.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
nagC; NagC protein
L3_063_052G1_scaffold_298_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2726..3751
DNA (1026bp) protein (342aa)
L-threonine 3-dehydrogenase n=1 Tax=Clostridium sp. D5 RepID=F0YUQ1_9CLOT
L-threonine 3-dehydrogenase {ECO:0000313|EMBL:EGB94621.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
theronine dehydrogenase-like Zn-dependent dehydrogenase
L3_063_052G1_scaffold_298_4
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3769..5127
DNA (1359bp) protein (453aa)
Gluconate transporter n=1 Tax=Roseburia sp. CAG:182 RepID=R7QWX4_9FIRM
Gluconate transporter {ECO:0000313|EMBL:CDF41810.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
gluconate transporter
L3_063_052G1_scaffold_298_5
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5205..6170
DNA (966bp) protein (322aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LS18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB84961.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L3_063_052G1_scaffold_298_6
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

6221..6607
DNA (387bp) protein (129aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (EC:4.4.1.5)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VN17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93526.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
L3_063_052G1_scaffold_298_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6791..11371)
DNA (4581bp) protein (1527aa)
Coagulation factor 5/8 type domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M8H8_9CLOT
Coagulation factor 5/8 type domain protein {ECO:0000313|EMBL:EHJ00933.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_063_052G1_scaffold_298_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11596..14223)
DNA (2628bp) protein (876aa)
Glucan endo-1,3-beta-glucosidase A1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K950_CLOBU
L-proline glycine betaine binding ABC transporter protein ProX / Osmotic adaptation {ECO:0000313|EMBL:KJZ87048.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
glycoside hydrolase family protein
L3_063_052G1_scaffold_298_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14345..16045)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHE3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87050.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
methyl-accepting chemotaxis sensory transducer
L3_063_052G1_scaffold_298_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16119..18821)
DNA (2703bp) protein (901aa)
Cellobiose phosphorylase-like protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDE9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88489.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
cellulase
L3_063_052G1_scaffold_298_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18844..19857)
DNA (1014bp) protein (338aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNW0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88504.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
LacI family transcriptional regulator
L3_063_052G1_scaffold_298_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20109..21452)
DNA (1344bp) protein (448aa)
srfJ; glucosylceramidase (EC:3.2.1.45)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JML4_CLOBU
Osmotically activated L-carnitine ABC transporter, ATP binding protein, opuCA {ECO:0000313|EMBL:KJZ87051.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L3_063_052G1_scaffold_298_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21470..24610)
DNA (3141bp) protein (1047aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K946_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85115.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_063_052G1_scaffold_298_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24780..25607)
DNA (828bp) protein (276aa)
Beta-glucanase {ECO:0000313|EMBL:KJZ87055.1}; EC=3.2.1.73 {ECO:0000313|EMBL:KJZ87055.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHD8_CLOBU
sugar ABC transporter permease
L3_063_052G1_scaffold_298_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25607..26602)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDE4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85137.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sugar ABC transporter permease
L3_063_052G1_scaffold_298_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26716..28059)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNV7_CLOBU
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD15378.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ABC-type sugar transport system, periplasmic component
L3_063_052G1_scaffold_298_17
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28628..30346)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KR35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY69285.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
glycoside hydrolase
L3_063_052G1_scaffold_298_18
unknown

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comp(30618..30770)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_063_052G1_scaffold_298_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31012..32838)
DNA (1827bp) protein (609aa)
glmS; glutamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKK4_CLOSA
L3_063_052G1_scaffold_298_20
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32840..34102)
DNA (1263bp) protein (421aa)
GroES-like protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZN3_9FIRM
GroES-like protein {ECO:0000313|EMBL:EEA84977.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
alcohol dehydrogenase
L3_063_052G1_scaffold_298_21
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34278..35204)
DNA (927bp) protein (309aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
Tagatose-6-phosphate kinase n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZN2_9FIRM
1-phosphofructokinase
L3_063_052G1_scaffold_298_22
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35210..35671)
DNA (462bp) protein (154aa)
Mannitol-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:EEA84975.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEA84975.1};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
Mannitol-specific phosphotransferase enzyme IIA component n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZN1_9FIRM
phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
L3_063_052G1_scaffold_298_23
unknown

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comp(35661..35768)
DNA (108bp) protein (36aa)

This feature has no annotations

L3_063_052G1_scaffold_298_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35793..37919)
DNA (2127bp) protein (709aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
Putative licABCH operon regulator n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQW5_CLOSY
PRD domain protein {ECO:0000313|EMBL:ERI79570.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_063_052G1_scaffold_298_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38002..39390)
DNA (1389bp) protein (463aa)
PTS system mannitol-specific transporter subunit IIC (EC:2.7.1.69)
PTS system mannitol-specific EIICB component n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAW7_9CLOT
PTS system mannitol-specific EIICB component {ECO:0000313|EMBL:EHF06458.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_063_052G1_scaffold_298_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39730..39906)
DNA (177bp) protein (59aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase BglA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JML1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87040.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Displaying 26 items

View Taxonomy