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L3_063_052G1_scaffold_317

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_317_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(220..813)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002D2CC1A
Uncharacterized protein {ECO:0000313|EMBL:AIY78812.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L3_063_052G1_scaffold_317_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

908..2143
DNA (1236bp) protein (412aa)
NAD n=4 Tax=Clostridium butyricum RepID=B1QU72_CLOBU
Flavoprotein {ECO:0000313|EMBL:KHD13922.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
flavo, family protein
L3_063_052G1_scaffold_317_3
unknown

Not on your lists

comp(2063..2521)
DNA (459bp) protein (153aa)

This feature has no annotations

L3_063_052G1_scaffold_317_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2636..2818)
DNA (183bp) protein (61aa)
Uncharacterized protein n=4 Tax=Clostridium botulinum RepID=B2TRE3_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDH92428.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_063_052G1_scaffold_317_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2908..4194)
DNA (1287bp) protein (429aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00011};; IMP--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00011}; TaxID=508767 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Alaska E43 / Type E3).;"
Adenylosuccinate synthetase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=PURA_CLOBA
L3_063_052G1_scaffold_317_6
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4364..5536
DNA (1173bp) protein (391aa)
Malate dehydrogenase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRK7_CLOPA
Malate dehydrogenase {ECO:0000313|EMBL:ETD66929.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
malate dehydrogenase
L3_063_052G1_scaffold_317_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5837..6634)
DNA (798bp) protein (266aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000313|EMBL:KIL08327.1}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000313|EMBL:KIL08327.1};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVY3_CLOBO
L3_063_052G1_scaffold_317_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6656..7990)
DNA (1335bp) protein (445aa)
dnaC; replicative DNA helicase DnaC (EC:3.6.4.12)
Replicative DNA helicase DnaC {ECO:0000313|EMBL:AGX45451.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AGX45451.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Replicative DNA helicase DnaC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0L6_CLOSA
L3_063_052G1_scaffold_317_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8013..9908)
DNA (1896bp) protein (632aa)
Lon family ATP-dependent protease n=1 Tax=Clostridium colicanis 209318 RepID=N9XXA4_9CLOT
ATPase AAA {ECO:0000313|EMBL:KJU71769.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
lonC; ATP-dependent protease, Lon family
L3_063_052G1_scaffold_317_10
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9921..10367)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRF8_CLOPA
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
rplI; 50S ribosomal protein L9
L3_063_052G1_scaffold_317_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10369..12312)
DNA (1944bp) protein (648aa)
DHH family protein n=2 Tax=Clostridium botulinum B RepID=B2TRG3_CLOBB
DHH family protein {ECO:0000313|EMBL:AIY81665.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
DHH family protein
L3_063_052G1_scaffold_317_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12328..12660)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V1T4_CLOBA
hypothetical protein
MazG-like family protein {ECO:0000313|EMBL:KIL08333.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_063_052G1_scaffold_317_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12840..13085)
DNA (246bp) protein (82aa)
30S ribosomal protein S18 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QPJ5_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rpsR; ribosomal protein S18
L3_063_052G1_scaffold_317_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13112..13570)
DNA (459bp) protein (153aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FQ57_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
ssb; single-stranded DNA-binding family protein
L3_063_052G1_scaffold_317_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13585..13872)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=4 Tax=Clostridium butyricum RepID=B1QSP7_CLOBU
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rpsF; 30S ribosomal protein S6
L3_063_052G1_scaffold_317_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13971..14165)
DNA (195bp) protein (65aa)
UPI0003D679CE related cluster n=1 Tax=unknown RepID=UPI0003D679CE
Uncharacterized protein {ECO:0000313|EMBL:ETI91985.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_063_052G1_scaffold_317_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14165..15052)
DNA (888bp) protein (296aa)
Mechanosensitive ion channel family protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V1T9_CLOBA
mechanosensitive ion channel family protein
Mechanosensitive ion channel protein {ECO:0000313|EMBL:KIL08338.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_063_052G1_scaffold_317_18
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15064..15303)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M1P5_9CLOT
hypothetical protein DUF3343
Uncharacterized protein {ECO:0000313|EMBL:AGF59545.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_063_052G1_scaffold_317_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15454..16599
DNA (1146bp) protein (382aa)
Cysteine desulfurase family protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V1U2_CLOBA
cysteine desulfurase
Cysteine desulfurase {ECO:0000313|EMBL:KIL08341.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_063_052G1_scaffold_317_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16654..17244
DNA (591bp) protein (197aa)
Putative sporulation protein YyaC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXG5_CLOSA
yyaC3; putative sporulation protein YyaC
Putative sporulation protein YyaC {ECO:0000313|EMBL:AGX45464.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_063_052G1_scaffold_317_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17272..17787)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MY11_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45465.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_063_052G1_scaffold_317_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17827..18669)
DNA (843bp) protein (281aa)
ParB-like partition protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRR6_CLOBU
spo0J; stage 0 sporulation protein J
Stage 0 sporulation protein J {ECO:0000313|EMBL:AIY83400.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_063_052G1_scaffold_317_23
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18683..19447)
DNA (765bp) protein (255aa)
Putative ATPase involved in chromosome partitioning n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FQ66_9CLOT
Putative ATPase involved in chromosome partitioning {ECO:0000313|EMBL:CDG02934.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
soj; sporulation initiation inhibitor protein Soj
L3_063_052G1_scaffold_317_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19580..20359)
DNA (780bp) protein (260aa)
Putative ParB-like partition protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUM8_9CLOT
noc; nucleoid occlusion protein
Nucleoid occlusion protein {ECO:0000313|EMBL:AIY82577.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_063_052G1_scaffold_317_25
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20493..21212)
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
rsmG; ribosomal RNA small subunit methyltransferase G (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium colicanis 209318 RepID=N9XKJ4_9CLOT
L3_063_052G1_scaffold_317_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21228..23111)
DNA (1884bp) protein (628aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBK5_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
L3_063_052G1_scaffold_317_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23124..24503)
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
tRNA modification GTPase mnmE n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4T9_9CLOT
trmE; tRNA modification GTPase TrmE
L3_063_052G1_scaffold_317_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24815..25444)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H5A0_9CLOT
putative RNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:KJU71789.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_063_052G1_scaffold_317_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25476..26264)
DNA (789bp) protein (263aa)
YidC/Oxa1 family membrane protein insertase n=2 Tax=Clostridium butyricum RepID=R0ABZ1_CLOBU
Putative sporulation protein/membrane protein insertase, OxaA family {ECO:0000313|EMBL:EEP52410.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
inner membrane protein translocase component YidC
L3_063_052G1_scaffold_317_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26294..26503)
DNA (210bp) protein (70aa)
membrane protein insertion efficiency factor n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=UPI0003B78AB1
putative membrane protein insertion efficiency factor
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 39 in total

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