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L3_063_052G1_scaffold_351

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_351_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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272..1018
DNA (747bp) protein (249aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Peptidyl-prolyl cis-trans isomerase family protein n=9 Tax=Clostridium perfringens RepID=H7CS63_CLOPF
peptidyl-prolyl cis-trans isomerase
L3_063_052G1_scaffold_351_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1481..2293
DNA (813bp) protein (271aa)
ABC-2 type transporter, permease protein n=5 Tax=Clostridium perfringens RepID=Q0TUG6_CLOP1
ABC-2 type transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_063_052G1_scaffold_351_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2311..3483
DNA (1173bp) protein (391aa)
ABC transporter, ATP-binding protein n=9 Tax=Clostridium perfringens RepID=H7CS65_CLOPF
ABC transporter ATP-binding protein
Probable ABC transporter {ECO:0000313|EMBL:BAB79976.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_351_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3497..4780
DNA (1284bp) protein (428aa)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT13525.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT13525.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Teichuronic acid biosynthesis glycosyl transferase n=10 Tax=Clostridium perfringens RepID=H7CS66_CLOPF
teichuronic acid biosynthesis glycosyl transferase
L3_063_052G1_scaffold_351_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4799..6034
DNA (1236bp) protein (412aa)
glycoside hydrolase family protein (EC:2.4.1.-)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT13528.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT13528.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Glycosyl transferase, group 1 family protein n=8 Tax=Clostridium perfringens RepID=H7CS67_CLOPF
L3_063_052G1_scaffold_351_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6048..7229
DNA (1182bp) protein (394aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridium perfringens RepID=Q0SWB1_CLOPS
teichoic acid ABC transporter ATP-binding protein
Probable ABC transporter {ECO:0000313|EMBL:BAB79979.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_351_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7344..8777
DNA (1434bp) protein (478aa)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT25607.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT25607.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
glycoside hydrolase family protein (EC:2.4.1.-)
Glycosyl transferase, group 1 family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RKA3_CLOPF
L3_063_052G1_scaffold_351_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8913..9566)
DNA (654bp) protein (218aa)
Haloacid dehalogenase, IA family protein n=5 Tax=Clostridium perfringens RepID=H7CS70_CLOPF
haloacid dehalogenase
Haloacid dehalogenase, IA family protein {ECO:0000313|EMBL:EDT13531.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_063_052G1_scaffold_351_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9649..10440)
DNA (792bp) protein (264aa)
[Fe] hydrogenase n=3 Tax=Clostridium perfringens RepID=H7CS71_CLOPF
[Fe] hydrogenase
[Fe] hydrogenase {ECO:0000313|EMBL:EDT70458.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_063_052G1_scaffold_351_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10770..11000)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CU28_CLOPF
[Fe] hydrogenase
[Fe] hydrogenase {ECO:0000313|EMBL:EIA18482.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_351_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11135..11281
DNA (147bp) protein (49aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS72_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25608.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_063_052G1_scaffold_351_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11698..11988
DNA (291bp) protein (97aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CS73_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18484.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_351_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12173..13471
DNA (1299bp) protein (433aa)
SagA protein n=4 Tax=Clostridium perfringens RepID=H7CS74_CLOPF
SagA protein {ECO:0000313|EMBL:EIA18485.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
SagA protein
L3_063_052G1_scaffold_351_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13645..14415
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RK98_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT25610.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_063_052G1_scaffold_351_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14418..15260
DNA (843bp) protein (281aa)
tetrapyrrole methylase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ribosomal RNA small subunit methyltransferase I n=7 Tax=Clostridium perfringens RepID=H7CS77_CLOPF
L3_063_052G1_scaffold_351_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15576..15815)
DNA (240bp) protein (80aa)
AbrB family transcriptional regulator n=6 Tax=Clostridium perfringens RepID=H7CS78_CLOPF
AbrB family transcriptional regulator
AbrB family transcriptional regulator {ECO:0000313|EMBL:EIA18400.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_351_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16507..17106
DNA (600bp) protein (200aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XNQ0_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79988.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_351_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17143..18018)
DNA (876bp) protein (292aa)
Putative aldose 1-epimerase n=2 Tax=Clostridium perfringens RepID=Q0TUF1_CLOP1
aldose 1-epimerase
Putative aldose 1-epimerase {ECO:0000313|EMBL:EDT23665.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_063_052G1_scaffold_351_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18129..19151)
DNA (1023bp) protein (341aa)
Transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CS81_CLOPF
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:EDT13892.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_063_052G1_scaffold_351_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19327..20178
DNA (852bp) protein (284aa)
YihY family protein n=3 Tax=Clostridium perfringens RepID=H7CS82_CLOPF
YihY family protein {ECO:0000313|EMBL:EIA18404.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_063_052G1_scaffold_351_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20239..21225)
DNA (987bp) protein (329aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EDT23696.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EDT23696.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
UDP-glucose 4-epimerase n=2 Tax=Clostridium perfringens RepID=B1R7X3_CLOPF
galE; UDP-glucose 4-epimerase
L3_063_052G1_scaffold_351_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21379..21723
DNA (345bp) protein (115aa)
Single-stranded DNA-binding protein n=11 Tax=Clostridium perfringens RepID=H7CS84_CLOPF
single-strand binding protein family
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_063_052G1_scaffold_351_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21799..23049)
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CU15_CLOPF
metallo-beta-lactamase
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EDT23675.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_063_052G1_scaffold_351_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23502..26909)
DNA (3408bp) protein (1136aa)
Endo-beta-N-acetylglucosaminidase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7X6_CLOPF
Endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EDT23685.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
endo-beta-N-acetylglucosaminidase
L3_063_052G1_scaffold_351_25
unknown

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27147..27305
DNA (159bp) protein (53aa)

This feature has no annotations

L3_063_052G1_scaffold_351_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27280..27585
DNA (306bp) protein (102aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS87_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18409.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_351_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27634..28035
DNA (402bp) protein (134aa)
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Holo-[acyl-carrier-protein] synthase n=7 Tax=Clostridium perfringens RepID=H7CS88_CLOPF
L3_063_052G1_scaffold_351_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28022..29521
DNA (1500bp) protein (500aa)
Carbohydrate kinase family protein n=2 Tax=Clostridium perfringens RepID=B1R7X9_CLOPF
Carbohydrate kinase family protein {ECO:0000313|EMBL:EDT23704.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
carbohydrate kinase
L3_063_052G1_scaffold_351_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29582..30175
DNA (594bp) protein (198aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CS89_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18411.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_351_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30422..30688
DNA (267bp) protein (89aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS90_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18412.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying items 1-30 of 33 in total

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