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L3_063_052G1_scaffold_381

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_381_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(670..900)
DNA (231bp) protein (77aa)
Phage shock protein G family protein n=3 Tax=Clostridiales RepID=G9YPG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35093.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_063_052G1_scaffold_381_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1004..1675)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45442.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_063_052G1_scaffold_381_3
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1716..2969)
DNA (1254bp) protein (418aa)
HTH domain-containing protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RDC3_9CLOT
HTH domain-containing protein {ECO:0000313|EMBL:CDC46878.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_063_052G1_scaffold_381_4
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3358..4794
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RYP1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50484.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
abgB; aminobenzoyl-glutamate utilization protein B
L3_063_052G1_scaffold_381_5
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4898..6178
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2ANL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ27680.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Di-and tricarboxylate transporters
L3_063_052G1_scaffold_381_6
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6561..7163)
DNA (603bp) protein (201aa)
Peptidase E (EC:3.4.13.21)
Peptidase E {ECO:0000313|EMBL:CBL24794.1}; EC=3.4.13.21 {ECO:0000313|EMBL:CBL24794.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Peptidase E n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVI6_9FIRM
L3_063_052G1_scaffold_381_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7301..7498)
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=E9SNK7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94073.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_063_052G1_scaffold_381_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7583..11287)
DNA (3705bp) protein (1235aa)
putative phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHF7_9FIRM
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EGJ45443.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_063_052G1_scaffold_381_9
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(11433..12953)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YAZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12772.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative ABC transporter substrate-binding protein
L3_063_052G1_scaffold_381_10
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(12968..13777)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YC63_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_063_052G1_scaffold_381_11
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14126..16363)
DNA (2238bp) protein (746aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T7G5_9FIRM
Formate acetyltransferase {ECO:0000313|EMBL:CDC69348.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L3_063_052G1_scaffold_381_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16360..17097)
DNA (738bp) protein (246aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
act; pyruvate formate-lyase-activating enzyme Act (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA97_9FIRM
L3_063_052G1_scaffold_381_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17315..19042)
DNA (1728bp) protein (576aa)
AGCS family alanine or glycine:cation symporter n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA98_9FIRM
AGCS family alanine or glycine:cation symporter {ECO:0000313|EMBL:EGJ47276.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
amino acid carrier protein
L3_063_052G1_scaffold_381_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19347..22121
DNA (2775bp) protein (925aa)
Protein translocase subunit SecA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA99_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
secA; preprotein translocase SecA subunit
L3_063_052G1_scaffold_381_15
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22236..22604
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RNU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC44746.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_063_052G1_scaffold_381_16
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22769..23104
DNA (336bp) protein (112aa)
PF12986 structural domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H1G6_9CLOT
PF12986 structural domain protein {ECO:0000313|EMBL:EJF39280.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_063_052G1_scaffold_381_17
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23372..24676
DNA (1305bp) protein (435aa)
Citrate transporter n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEZ0_ALKOO
Citrate transporter {ECO:0000313|EMBL:KAJ50617.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
citrate transporter
L3_063_052G1_scaffold_381_18
Fretibacterium fastidiosum, Fretibacterium, Synergistales, Synergistia, Synergistetes, Bacteria

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24712..25539
DNA (828bp) protein (276aa)
Beta-lactamase class A (EC:3.5.2.6)
Beta-lactamase class A {ECO:0000313|EMBL:CBL27695.1}; EC=3.5.2.6 {ECO:0000313|EMBL:CBL27695.1};; TaxID=651822 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Fretibacterium.;" source="Fretibacterium fastidiosum.;"
Beta-lactamase class A n=1 Tax=Fretibacterium fastidiosum RepID=D4M750_9BACT
L3_063_052G1_scaffold_381_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25683..27044
DNA (1362bp) protein (454aa)
putative RNA methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA95_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EGJ47273.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_063_052G1_scaffold_381_20
unknown

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27065..27505
DNA (441bp) protein (147aa)

This feature has no annotations

L3_063_052G1_scaffold_381_21
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

27611..28813
DNA (1203bp) protein (401aa)
SAM-dependent methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EKQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX91934.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L3_063_052G1_scaffold_381_22
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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29194..29598
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HAD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26650.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Displaying 22 items

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