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L3_063_052G1_scaffold_415

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_415_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(405..1418)
DNA (1014bp) protein (338aa)
nitrate ABC transporter substrate-binding protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289B427
NMT1-like family protein {ECO:0000313|EMBL:KIE44425.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter substrate-binding protein
L3_063_052G1_scaffold_415_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1495..2310)
DNA (816bp) protein (272aa)
sulfonate ABC transporter permease n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A155F
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KIE45157.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter permease protein
L3_063_052G1_scaffold_415_3
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2300..2572)
DNA (273bp) protein (91aa)
taurine ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000288DCAD
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDI48463.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L3_063_052G1_scaffold_415_4
unknown

Not on your lists

comp(2778..2984)
DNA (207bp) protein (69aa)

This feature has no annotations

L3_063_052G1_scaffold_415_5
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3097..4071)
DNA (975bp) protein (325aa)
Phage site-specific recombinase n=1 Tax=Bacillus subtilis subsp. subtilis str. NCIB 3610 RepID=S5DVZ7_BACIU
Phage site-specific recombinase {ECO:0000313|EMBL:AGQ21244.1}; TaxID=535026 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis subsp. subtilis str. NCIB 3610.;"
hypothetical protein
L3_063_052G1_scaffold_415_6
Hafnia alvei, Hafnia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4204..4827)
DNA (624bp) protein (208aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1002364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Hafnia.;" source="Hafnia alvei ATCC 51873.;"
Lysozyme n=1 Tax=Hafnia alvei ATCC 51873 RepID=G9Y3Q8_HAFAL
glycoside hydrolase family 24
L3_063_052G1_scaffold_415_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4796..5215)
DNA (420bp) protein (140aa)
Toxin secretion/phage lysis holin n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UT74_CLOBO
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:EES48132.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
toxin secretion/phage lysis holin
L3_063_052G1_scaffold_415_8
unknown

Not on your lists

comp(5311..5835)
DNA (525bp) protein (175aa)

This feature has no annotations

L3_063_052G1_scaffold_415_9
unknown

Not on your lists

comp(5858..8287)
DNA (2430bp) protein (810aa)

This feature has no annotations

L3_063_052G1_scaffold_415_10
unknown

Not on your lists

comp(8287..8433)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_063_052G1_scaffold_415_11
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8433..10478)
DNA (2046bp) protein (682aa)
Carbohydrate binding domain protein n=2 Tax=Bacteroidetes RepID=F3XQ98_9FLAO
Carbohydrate binding domain protein {ECO:0000313|EMBL:EHH01543.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
antifreeze protein
L3_063_052G1_scaffold_415_12
unknown

Not on your lists

comp(10471..11682)
DNA (1212bp) protein (404aa)

This feature has no annotations

L3_063_052G1_scaffold_415_13
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11686..12030)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Paenibacillus alvei DSM 29 RepID=K4ZGT9_PAEAL
Uncharacterized protein {ECO:0000313|EMBL:CEG26015.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
hypothetical protein
L3_063_052G1_scaffold_415_14
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12027..14945)
DNA (2919bp) protein (973aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FBD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11057.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
phage-like protein
L3_063_052G1_scaffold_415_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14942..15196)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3DCZ1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF24682.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L3_063_052G1_scaffold_415_16
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15291..15605)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SAA4_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EHQ63907.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
L3_063_052G1_scaffold_415_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15658..16146)
DNA (489bp) protein (163aa)
Phage major tail 2 family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DDR1_CLODI
Phage major tail 2 family protein {ECO:0000313|EMBL:EQF24695.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L3_063_052G1_scaffold_415_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16153..16551)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3DE15_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF24681.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L3_063_052G1_scaffold_415_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16548..16937)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3DD05_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF24697.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L3_063_052G1_scaffold_415_20
Clostridium sp. CAG:1000, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16938..17279)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1000 RepID=R5A3Y3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX36429.1}; TaxID=1262768 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1000.;"
hypothetical protein
L3_063_052G1_scaffold_415_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17281..17595)
DNA (315bp) protein (105aa)
Uncharacterized protein n=3 Tax=root RepID=H7CW56_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17009.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_063_052G1_scaffold_415_22
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(17601..17966)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QUN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32348.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_063_052G1_scaffold_415_23
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17980..18864)
DNA (885bp) protein (295aa)
Phage major capsid protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F710_9CLOT
Phage major capsid protein {ECO:0000313|EMBL:CCY00663.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
putative phage major capsid protein
L3_063_052G1_scaffold_415_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18895..19458)
DNA (564bp) protein (188aa)
Phage minor structural GP20 family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DE28_CLODI
Phage minor structural GP20 family protein {ECO:0000313|EMBL:EQF24696.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
Phage minor structural protein GP20
L3_063_052G1_scaffold_415_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19596..20717)
DNA (1122bp) protein (374aa)
Phage minor capsid 2 family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D381_CLODI
Phage minor capsid 2 family protein {ECO:0000313|EMBL:EQF22349.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
phage minor capsid protein
L3_063_052G1_scaffold_415_26
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20717..22204)
DNA (1488bp) protein (496aa)
Putative phage minor capsid protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I909_CLOCE
phage minor capsid protein
Putative phage minor capsid protein {ECO:0000313|EMBL:ACL77341.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L3_063_052G1_scaffold_415_27
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22325..23677)
DNA (1353bp) protein (451aa)
PBSX family phage terminase, large subunit n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BHV3_9FIRM
PBSX family phage terminase, large subunit {ECO:0000313|EMBL:EHO19187.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
phage terminase, large subunit
L3_063_052G1_scaffold_415_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23679..24395)
DNA (717bp) protein (239aa)
Phage protein n=1 Tax=Clostridium botulinum (strain Kyoto / Type A2) RepID=C1FR96_CLOBJ
phage protein
Phage protein {ECO:0000313|EMBL:ACO84217.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
L3_063_052G1_scaffold_415_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24400..25032)
DNA (633bp) protein (211aa)
Recombinase n=2 Tax=Clostridium botulinum C str. Stockholm RepID=F7MJ37_CLOBO
Recombinase {ECO:0000313|EMBL:EGO89098.1}; TaxID=929505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C str. Stockholm.;"
resolvase/recombinase
L3_063_052G1_scaffold_415_30
Paenibacillus graminis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25532..26161)
DNA (630bp) protein (210aa)
Phage integrase n=1 Tax=Bacillus cereus VDM006 RepID=R8QB54_BACCE
phage integrase family protein
Integrase {ECO:0000313|EMBL:AIQ70371.1}; TaxID=189425 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus graminis.;"
Displaying items 1-30 of 33 in total

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