ggKbase home page

L3_063_052G1_scaffold_417

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_417_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..424
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQW8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16021.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_063_052G1_scaffold_417_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

555..1949
DNA (1395bp) protein (465aa)
Aldehyde dehydrogenase n=1 Tax=Clostridium perfringens F262 RepID=H7CZ15_CLOPF
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
aldehyde dehydrogenase
L3_063_052G1_scaffold_417_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2646..4025
DNA (1380bp) protein (460aa)
Glucosyl hydrolase family protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZ14_CLOPF
Glucosyl hydrolase family protein {ECO:0000313|EMBL:EIA16080.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
glycosyl hydrolase
L3_063_052G1_scaffold_417_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4209..4910
DNA (702bp) protein (234aa)
Mannose-1-phosphate guanylyltransferase [GDP] (GDP-mannose pyrophosphorylase) (GMP) {ECO:0000313|EMBL:EDS78913.1}; EC=2.7.7.22 {ECO:0000313|EMBL:EDS78913.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Mannose-1-phosphate guanylyltransferase [GDP] (GDP-mannose pyrophosphorylase) (GMP) n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMS4_CLOPF
nucleotidyl transferase
L3_063_052G1_scaffold_417_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4951..6564)
DNA (1614bp) protein (538aa)
Site-specific recombinase, resolvase family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMS5_CLOPF
Site-specific recombinase, resolvase family {ECO:0000313|EMBL:EDS78832.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
resolvase site-specific recombinase
L3_063_052G1_scaffold_417_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6576..6752)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMS6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS78896.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_063_052G1_scaffold_417_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6819..8468)
DNA (1650bp) protein (550aa)
Site-specific recombinase, resolvase family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMS7_CLOPF
Site-specific recombinase, resolvase family {ECO:0000313|EMBL:EDS78976.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
resolvase site-specific recombinase
L3_063_052G1_scaffold_417_8
unknown

Not on your lists

comp(8425..9540)
DNA (1116bp) protein (372aa)

This feature has no annotations

L3_063_052G1_scaffold_417_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9776..10213)
DNA (438bp) protein (146aa)
Putative resolvase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMZ7_CLOP1
resolvase
Uncharacterized protein {ECO:0000313|EMBL:KJU71822.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_063_052G1_scaffold_417_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10517..10903)
DNA (387bp) protein (129aa)
Precorrin-6y C5,15-methyltransferase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMS9_CLOPF
Precorrin-6y C5,15-methyltransferase {ECO:0000313|EMBL:EDS78961.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
transcriptional regulator
L3_063_052G1_scaffold_417_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10963..11787)
DNA (825bp) protein (275aa)
Putative DNA-directed RNA polymerase, omega subunit family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMT0_CLOPF
Putative DNA-directed RNA polymerase, omega subunit family protein {ECO:0000313|EMBL:EDS78906.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_063_052G1_scaffold_417_12
unknown

Not on your lists

11842..11970
DNA (129bp) protein (43aa)

This feature has no annotations

L3_063_052G1_scaffold_417_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11960..13699
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMT1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS78873.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_063_052G1_scaffold_417_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13689..15176
DNA (1488bp) protein (496aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
DNA helicase II n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMT2_CLOPF
hypothetical protein
L3_063_052G1_scaffold_417_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15337..16800
DNA (1464bp) protein (488aa)
3D domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMT3_CLOPF
3D domain protein {ECO:0000313|EMBL:EDS78818.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
type i restriction enzyme m subunit
L3_063_052G1_scaffold_417_16
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16804..17973
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86078.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hsdS; putative type I restriction-modification system specificity subunit
L3_063_052G1_scaffold_417_17
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17999..18703
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Bacillus sp. 1NLA3E RepID=N0ATI8_9BACI
Uncharacterised protein {ECO:0000313|EMBL:CEP99580.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_063_052G1_scaffold_417_18
unknown

Not on your lists

18749..19099
DNA (351bp) protein (117aa)

This feature has no annotations

L3_063_052G1_scaffold_417_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19368..22700
DNA (3333bp) protein (1111aa)
Type III restriction enzyme, res subunit family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMT7_CLOPF
Type III restriction enzyme, res subunit family {ECO:0000313|EMBL:EDS78834.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
type i restriction enzyme r subunit
L3_063_052G1_scaffold_417_20
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22900..23730
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003758155
Uncharacterised protein {ECO:0000313|EMBL:CEQ22080.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_063_052G1_scaffold_417_21
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23723..24304
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z800_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CEQ22078.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_063_052G1_scaffold_417_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24301..24666)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMT9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS78859.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_063_052G1_scaffold_417_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24736..25212
DNA (477bp) protein (159aa)
Superoxide dismutase [Mn] {ECO:0000313|EMBL:EDS78970.1}; EC=1.15.1.1 {ECO:0000313|EMBL:EDS78970.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Superoxide dismutase [Mn] n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMU0_CLOPF
mannose-1-phosphate guanylyltransferase
L3_063_052G1_scaffold_417_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25441..26007
DNA (567bp) protein (189aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZ12_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16078.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_417_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26397..26975
DNA (579bp) protein (193aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CZ11_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23715.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_063_052G1_scaffold_417_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27063..27683
DNA (621bp) protein (207aa)
GntR family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CZ10_CLOPF
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDT23742.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Displaying 26 items

View Taxonomy