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L3_063_052G1_scaffold_427

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_427_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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248..1210
DNA (963bp) protein (321aa)
Probable endo-1,4-beta-xylanase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XK96_CLOPE
endo-1,4-beta-xylanase
Probable endo-1,4-beta-xylanase {ECO:0000313|EMBL:BAB81213.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_427_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1261..2844)
DNA (1584bp) protein (528aa)
ABC transporter, ATP-binding protein n=6 Tax=Clostridium perfringens RepID=Q0TQ97_CLOP1
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT13950.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter ATP-binding protein
L3_063_052G1_scaffold_427_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3031..4329
DNA (1299bp) protein (433aa)
Uracil-xanthine permease n=3 Tax=Clostridium perfringens RepID=H1CR94_CLOPF
Putative uracil permease {ECO:0000313|EMBL:EDS80019.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
uracil transporter
L3_063_052G1_scaffold_427_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4755..5768
DNA (1014bp) protein (338aa)
3D/G5 domain-containing protein n=5 Tax=Clostridium perfringens RepID=H7CWN2_CLOPF
hypothetical protein
3D/G5 domain protein {ECO:0000313|EMBL:EDT26893.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_063_052G1_scaffold_427_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5992..6279
DNA (288bp) protein (96aa)
UPF0045 protein CPE1503 n=7 Tax=Clostridium perfringens RepID=Y1503_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16782.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_427_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6376..7398
DNA (1023bp) protein (341aa)
N-acetylmuramoyl-L-alanine amidase domain-containing protein n=1 Tax=Clostridium perfringens F262 RepID=H7CWN0_CLOPF
N-acetylmuramoyl-L-alanine amidase domain-containing protein {ECO:0000313|EMBL:EIA16781.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N-acetylmuramoyl-L-alanine amidase
L3_063_052G1_scaffold_427_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7528..8238
DNA (711bp) protein (237aa)
LytTr family DNA-binding response regulator n=8 Tax=Clostridium perfringens RepID=H7CWM9_CLOPF
virR; DNA-binding response regulator, LytTr family
DNA-binding response regulator VirR {ECO:0000313|EMBL:EDT24754.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_063_052G1_scaffold_427_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8277..9554
DNA (1278bp) protein (426aa)
Sensor histidine kinase VirS n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGJ0_CLOPF
Sensor histidine kinase VirS {ECO:0000313|EMBL:EDS81083.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
virS; sensor histidine kinase VirS
L3_063_052G1_scaffold_427_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9725..10603
DNA (879bp) protein (293aa)
Metallo-beta-lactamase family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SSV8_CLOPS
metallo-beta-lactamase family protein
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:ABG87634.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_063_052G1_scaffold_427_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10928..11431
DNA (504bp) protein (168aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CWM7_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT72489.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_063_052G1_scaffold_427_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11643..12995)
DNA (1353bp) protein (451aa)
UPF0210 protein CPF_1748 n=3 Tax=Clostridium perfringens RepID=Y1748_CLOP1
hypothetical protein
UPF0210 protein CJD_2056 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_063_052G1_scaffold_427_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13012..13281)
DNA (270bp) protein (90aa)
UPF0237 protein CPE1496 n=3 Tax=Clostridium perfringens RepID=Y1496_CLOPE
hypothetical protein
UPF0237 protein AC1_1893 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_063_052G1_scaffold_427_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13480..14517
DNA (1038bp) protein (346aa)
PP-loop family protein n=10 Tax=Clostridium perfringens RepID=Q0SSW1_CLOPS
PP-loop family protein
PP-loop family protein {ECO:0000313|EMBL:EDT72473.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_063_052G1_scaffold_427_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14791..15288
DNA (498bp) protein (166aa)
DedA family protein n=3 Tax=Clostridium perfringens RepID=B1BN16_CLOPF
DedA family protein {ECO:0000313|EMBL:EDS78765.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_063_052G1_scaffold_427_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15359..15883
DNA (525bp) protein (175aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CWM2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81198.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_427_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16085..16507)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CR81_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26888.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_063_052G1_scaffold_427_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16742..17518
DNA (777bp) protein (259aa)
Putative membrane protein n=4 Tax=Clostridium perfringens RepID=Q0TQB2_CLOP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDS78779.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_063_052G1_scaffold_427_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17622..18479
DNA (858bp) protein (286aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=B1R6Y3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26927.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_063_052G1_scaffold_427_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18684..18869
DNA (186bp) protein (62aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CWL8_CLOPF
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EDT13359.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_063_052G1_scaffold_427_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18943..19044
DNA (102bp) protein (34aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CWL7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87574.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_063_052G1_scaffold_427_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19116..20120
DNA (1005bp) protein (335aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CR76_CLOPF
Lipoprotein, putative {ECO:0000313|EMBL:EDT26880.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_063_052G1_scaffold_427_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20095..20850
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CR75_CLOPF
ABC transporter, permease protein {ECO:0000313|EMBL:EDT26892.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter permease
L3_063_052G1_scaffold_427_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20852..21538
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CR74_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT24044.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
ABC transporter
L3_063_052G1_scaffold_427_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21559..22887
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BY66_CLOPF
MATE efflux family protein {ECO:0000313|EMBL:EDT13349.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
MATE efflux family protein
L3_063_052G1_scaffold_427_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23145..23339
DNA (195bp) protein (65aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CWL2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16997.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_063_052G1_scaffold_427_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23379..24344
DNA (966bp) protein (322aa)
PfkB family kinase n=6 Tax=Clostridium perfringens RepID=H7CWL1_CLOPF
sugar kinase
Probable sugar kinase {ECO:0000313|EMBL:BAB81188.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_427_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24421..24573
DNA (153bp) protein (51aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CWL0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13358.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_063_052G1_scaffold_427_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24614..26269)
DNA (1656bp) protein (552aa)
Sulfate permease, SulP family n=4 Tax=Clostridium perfringens RepID=Q0TQC3_CLOP1
SulP family sulfate permease
Sulfate permease, SulP family {ECO:0000313|EMBL:EDT26894.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_063_052G1_scaffold_427_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26489..27124
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XKC1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81185.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_427_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27243..27320
DNA (78bp) protein (26aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CWK7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26872.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Displaying 30 items

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