name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_063_052G1_scaffold_439_1
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1..1176)
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PTS system, lactose/cellobiose IIC component family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W4M9_CLOBI
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
PTS system, cellobiose-specific IIC component
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L3_063_052G1_scaffold_439_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1203..1817)
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MgsA AAA+ ATPase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSQ5_CLOBI
MgsA AAA+ ATPase family protein {ECO:0000313|EMBL:EQK44518.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Hypothetical protein
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L3_063_052G1_scaffold_439_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
1892..2584
|
Helix-turn-helix domain, rpiR family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D1M0_CLOSO
SIS domain-containing protein,MurPQ operon repressor,DNA-binding transcriptional repressor RpiR,Predicted phosphosugar isomerases,6-phospho 3-hexuloisomerase,Helix-turn-helix domain, rpiR family {ECO:0000313|EMBL:CEK32748.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
transcriptional regulator
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L3_063_052G1_scaffold_439_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2771..3436)
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Phosphonate-transporting ATPase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAR1_9CLOT
Phosphonate-transporting ATPase {ECO:0000313|EMBL:EOR26459.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ABC transporter-like protein
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L3_063_052G1_scaffold_439_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(3436..4746)
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Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26460.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
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L3_063_052G1_scaffold_439_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(4749..5810)
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Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26461.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ABC transporter permease
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L3_063_052G1_scaffold_439_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(5897..7687)
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aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FAF5_9CLOT
Putative Aspartate--tRNA ligase {ECO:0000313|EMBL:CDG02023.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
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L3_063_052G1_scaffold_439_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(7706..8956)
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Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hisS; histidine--tRNA ligase HisS (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FN38_9CLOT
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L3_063_052G1_scaffold_439_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8968..10398)
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hemZ; coproporphyrinogen dehydrogenase HemZ (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:AIY82671.1}; EC=1.3.99.22 {ECO:0000313|EMBL:AIY82671.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2H9_9CLOT
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L3_063_052G1_scaffold_439_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(10407..11024)
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Metallo-beta-lactamase family protein n=2 Tax=Clostridium botulinum B RepID=B2TN02_CLOBB
metallo-beta-lactamase family protein
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:ACD23805.1}; Putative metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:CDH89955.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
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L3_063_052G1_scaffold_439_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(11039..11488)
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D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=3 Tax=Clostridium butyricum RepID=B1R2Q3_CLOBU
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L3_063_052G1_scaffold_439_12
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(11501..13687)
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relA; GTP pyrophosphokinase (EC:2.7.6.5)
Putative RelA/SpoT family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FAG0_9CLOT
Putative RelA/SpoT family protein {ECO:0000313|EMBL:CDG02028.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
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L3_063_052G1_scaffold_439_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(13799..14317)
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Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H747_9CLOT
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L3_063_052G1_scaffold_439_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(14388..15245)
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Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BUA9_9CLOT
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EOR20719.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
putative single-stranded-DNA-specific exonuclease recJ
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L3_063_052G1_scaffold_439_15
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(15564..16421)
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Protein-export membrane protein SecF n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0D6_9CLOT
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
protein export protein SecD
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L3_063_052G1_scaffold_439_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(16428..17669)
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Protein export protein SecD n=2 Tax=Clostridium botulinum B RepID=B2TMZ7_CLOBB
secD; export membrane protein SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
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L3_063_052G1_scaffold_439_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(17752..18123)
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Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TMZ6_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY81285.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
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L3_063_052G1_scaffold_439_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(18174..18443)
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Preprotein translocase, YajC subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEU5_9CLOT
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EKY26200.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
yajC; preprotein translocase, YajC subunit
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L3_063_052G1_scaffold_439_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(18543..19682)
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Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F0E6_9CLOT
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L3_063_052G1_scaffold_439_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(19695..20720)
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queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Clostridium botulinum E RepID=QUEA_CLOBA
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L3_063_052G1_scaffold_439_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(20735..21769)
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ruvB; Holliday junction DNA helicase RuvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UBG0_9CLOT
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L3_063_052G1_scaffold_439_22
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(21781..22392)
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Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
ruvA; Holliday junction DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FN47_9CLOT
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L3_063_052G1_scaffold_439_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(22556..23137)
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Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MST7_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43849.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
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L3_063_052G1_scaffold_439_24
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
23292..24191
|
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EHI98181.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EHI98181.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LYC0_9CLOT
short-chain dehydrogenase/reductase SDR
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L3_063_052G1_scaffold_439_25
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(24315..24692)
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Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z9E3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGR78760.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
hypothetical protein
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L3_063_052G1_scaffold_439_26
unknown
|
Not on your lists |
comp(24757..25023)
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This feature has no annotations |
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L3_063_052G1_scaffold_439_27
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(25302..26366)
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Putative uncharacterized protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NQ47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR32527.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
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L3_063_052G1_scaffold_439_28
unknown
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Not on your lists |
comp(26329..26787)
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This feature has no annotations |