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L3_063_052G1_scaffold_455

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_455_1
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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496..1542
DNA (1047bp) protein (349aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=2 Tax=Clostridium bifermentans RepID=T4VYQ6_CLOBI
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L3_063_052G1_scaffold_455_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1556..2116
DNA (561bp) protein (187aa)
Cobinamide kinase / cobinamide phosphate guanyltransferase family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W842_CLOBI
Cobinamide kinase / cobinamide phosphate guanyltransferase family protein {ECO:0000313|EMBL:EQK49271.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
L3_063_052G1_scaffold_455_3
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2121..2891
DNA (771bp) protein (257aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Cobalamin synthase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VZZ1_CLOBI
cobalamin synthase
L3_063_052G1_scaffold_455_4
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2903..3508
DNA (606bp) protein (202aa)
cobC; Cobalamin biosynthesis phosphoglycerate mutaseCobC (EC:3.1.3.-)
Histidine phosphatase super family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VXX1_CLOBI
Histidine phosphatase super family protein {ECO:0000313|EMBL:EQK46248.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L3_063_052G1_scaffold_455_5
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3825..5336
DNA (1512bp) protein (504aa)
Cobyric acid synthase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VRA6_CLOBI
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
cobQ; cobyric acid synthase
L3_063_052G1_scaffold_455_6
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5345..6700
DNA (1356bp) protein (452aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Cobyrinic acid A,C-diamide synthase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VYR1_CLOBI
cbiA; cobyrinic acid a,c-diamide synthase
L3_063_052G1_scaffold_455_7
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6693..7649
DNA (957bp) protein (319aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VZJ1_CLOBI
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
cbiB; cobalamin biosynthesis protein
L3_063_052G1_scaffold_455_8
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7667..8737
DNA (1071bp) protein (357aa)
cobD; Threonine-phosphate decarboxylase(L-threonine-O-3-phosphate decarboxylase), CobD/CbiBfamily (EC:4.1.1.81)
Aminotransferase class-V family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VZZ6_CLOBI
Aminotransferase class-V family protein {ECO:0000313|EMBL:EQK46252.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L3_063_052G1_scaffold_455_9
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8739..9611
DNA (873bp) protein (291aa)
GHMP kinase N terminal domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VXX6_CLOBI
GHMP kinase N terminal domain protein {ECO:0000313|EMBL:EQK46253.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
cobalamin biosynthesis kinase
L3_063_052G1_scaffold_455_10
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9614..10246
DNA (633bp) protein (211aa)
Cobalt-precorrin-8X methylmutase {ECO:0000313|EMBL:EQK46254.1}; EC=5.4.1.- {ECO:0000313|EMBL:EQK46254.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Cobalt-precorrin-8X methylmutase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VRB1_CLOBI
cbiC; cobalt-precorrin-8X methylmutase
L3_063_052G1_scaffold_455_11
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10257..11384
DNA (1128bp) protein (376aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
Putative cobalt-precorrin-6A synthase [deacetylating] n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VZS6_CLOBI
cbiD; putative cobalamin biosynthesis protein CbiD
L3_063_052G1_scaffold_455_12
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11377..11985
DNA (609bp) protein (203aa)
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit {ECO:0000313|EMBL:EQK46256.1}; EC=2.1.1.132 {ECO:0000313|EMBL:EQK46256.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VZJ6_CLOBI
cobalt-precorrin-6Y C(5)-methyltransferase
L3_063_052G1_scaffold_455_13
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11975..12532
DNA (558bp) protein (186aa)
Precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit {ECO:0000313|EMBL:EQK46257.1}; EC=2.1.1.132 {ECO:0000313|EMBL:EQK46257.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4W002_CLOBI
cbiT; cobalt-precorrin-6Y C(15)-methyltransferase
L3_063_052G1_scaffold_455_14
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12537..13289
DNA (753bp) protein (251aa)
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:EQK46258.1}; EC=2.1.1.133 {ECO:0000313|EMBL:EQK46258.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Precorrin-4 C11-methyltransferase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VXY0_CLOBI
cbiF; precorrin-4 C(11)-methyltransferase
L3_063_052G1_scaffold_455_15
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13273..14349
DNA (1077bp) protein (359aa)
Cobalamin synthesis G family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VRB7_CLOBI
Cobalamin synthesis G family protein {ECO:0000313|EMBL:EQK46259.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
cobalamin biosynthesis protein CbiG
L3_063_052G1_scaffold_455_16
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14337..15065
DNA (729bp) protein (243aa)
Cobalt-precorrin-3B C(17)-methyltransferase {ECO:0000313|EMBL:EQK46260.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQK46260.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
cbiH; Cobalt-precorrin-3B C(17)-methyltransferase(Cobalt-precorrin-3 methyltransferase) (Cobalt-precorrin-3methylase) (EC:2.1.1.-)
Cobalt-precorrin-3B C(17)-methyltransferase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VYR9_CLOBI
L3_063_052G1_scaffold_455_17
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15056..15811
DNA (756bp) protein (252aa)
Precorrin-6x reductase {ECO:0000313|EMBL:EQK46261.1}; EC=1.3.1.54 {ECO:0000313|EMBL:EQK46261.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Precorrin-6x reductase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VZK1_CLOBI
cbiJ; cobalt-precorrin-6a reductase
L3_063_052G1_scaffold_455_18
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15814..16608
DNA (795bp) protein (265aa)
Sirohydrochlorin cobaltochelatase {ECO:0000313|EMBL:EQK46262.1}; EC=4.99.1.3 {ECO:0000313|EMBL:EQK46262.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
cbiK; sirohydrochlorin cobaltochelatase (EC:4.99.1.3)
Sirohydrochlorin cobaltochelatase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4W007_CLOBI
L3_063_052G1_scaffold_455_19
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16592..17320
DNA (729bp) protein (243aa)
Precorrin-2 C20-methyltransferase {ECO:0000313|EMBL:EQK46263.1}; EC=2.1.1.130 {ECO:0000313|EMBL:EQK46263.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Precorrin-2 C20-methyltransferase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VXY4_CLOBI
cbiK; sirohydrochlorin cobaltochelatase
L3_063_052G1_scaffold_455_20
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17335..18570
DNA (1236bp) protein (412aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hemA; glutamyl-tRNA reductase (EC:1.2.1.-)
Glutamyl-tRNA reductase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VRC2_CLOBI
L3_063_052G1_scaffold_455_21
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18597..19502
DNA (906bp) protein (302aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VYS4_CLOBI
L3_063_052G1_scaffold_455_22
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19492..20994
DNA (1503bp) protein (501aa)
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EQK46266.1}; EC=2.1.1.107 {ECO:0000313|EMBL:EQK46266.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
cobA_+_hemD; bifunctional uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VZK5_CLOBI
L3_063_052G1_scaffold_455_23
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21015..21980
DNA (966bp) protein (322aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4W011_CLOBI
L3_063_052G1_scaffold_455_24
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21986..23284
DNA (1299bp) protein (433aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=2 Tax=Clostridium bifermentans RepID=T4VXY8_CLOBI
hemL; glutamate-1-semialdehyde-2,1-aminomutase
L3_063_052G1_scaffold_455_25
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23528..23881
DNA (354bp) protein (118aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
Alkylhydroperoxidase AhpD family core domain protein n=2 Tax=Clostridium bifermentans RepID=T4VRC5_CLOBI
alkylhydroperoxidase AhpD family core domain protein
L3_063_052G1_scaffold_455_26
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24016..24465
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VYS9_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK46270.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L3_063_052G1_scaffold_455_27
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24504..25082
DNA (579bp) protein (193aa)
Siroheme synthase, N-terminal domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VZL0_CLOBI
Siroheme synthase, N-terminal domain protein {ECO:0000313|EMBL:EQK46271.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
siroheme synthase
Displaying 27 items

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