ggKbase home page

L3_063_052G1_scaffold_474

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_474_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..226
DNA (225bp) protein (75aa)
Putative ATPase n=1 Tax=Clostridium perfringens RepID=F7J0E2_CLOPF
Putative ATPase of HSP70 class {ECO:0000313|EMBL:EDS79377.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_063_052G1_scaffold_474_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

229..480
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BUK6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14553.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_063_052G1_scaffold_474_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

599..700
DNA (102bp) protein (34aa)
ISCpe3, transposase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SV93_CLOPS
ISCpe3, transposase
ISCpe3, transposase {ECO:0000313|EMBL:ABG87231.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_063_052G1_scaffold_474_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

783..1007
DNA (225bp) protein (75aa)
Transposase n=1 Tax=Clostridium perfringens RepID=Q2L5S1_CLOPF
Transposase {ECO:0000313|EMBL:BAE79069.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
ISCpe3, transposase
L3_063_052G1_scaffold_474_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1236..2024)
DNA (789bp) protein (263aa)
Transcriptional regulator n=2 Tax=Clostridium perfringens RepID=B1BUK7_CLOPF
Transcriptional regulator {ECO:0000313|EMBL:EDT14570.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
methylase involved in ubiquinone/menaquinone biosynthesis
L3_063_052G1_scaffold_474_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2021..3169)
DNA (1149bp) protein (383aa)
Putative metal-dependent phosphoesterase n=2 Tax=Clostridium perfringens RepID=B1BUK8_CLOPF
Putative metal-dependent phosphoesterase {ECO:0000313|EMBL:EDT14593.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
PHP domain-containing protein
L3_063_052G1_scaffold_474_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3166..5406)
DNA (2241bp) protein (747aa)
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase n=2 Tax=Clostridium perfringens RepID=B1BUK9_CLOPF
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase {ECO:0000313|EMBL:EDT14559.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
phosphoketolase
L3_063_052G1_scaffold_474_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5426..6493)
DNA (1068bp) protein (356aa)
Radical SAM domain protein n=2 Tax=Clostridium perfringens RepID=B1BUL0_CLOPF
Radical SAM domain protein {ECO:0000313|EMBL:EDT14614.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_063_052G1_scaffold_474_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6666..8534)
DNA (1869bp) protein (623aa)
Putative peptide synthetase n=2 Tax=Clostridium perfringens RepID=B1BUL1_CLOPF
Putative peptide synthetase {ECO:0000313|EMBL:EDT14610.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hybrid nonribosomal peptide synthetase/polyketide synthase
L3_063_052G1_scaffold_474_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8564..9184)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BUL2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14606.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
2-haloalkanoic acid dehalogenase
L3_063_052G1_scaffold_474_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9263..10522)
DNA (1260bp) protein (420aa)
Putative CapK protein n=2 Tax=Clostridium perfringens RepID=B1BUL3_CLOPF
Putative CapK protein {ECO:0000313|EMBL:EDT14597.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
AMP-dependent synthetase and ligase
L3_063_052G1_scaffold_474_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10541..10786)
DNA (246bp) protein (82aa)
Acyl carrier protein n=2 Tax=Clostridium perfringens RepID=B1BUL4_CLOPF
Acyl carrier protein {ECO:0000256|RuleBase:RU003545}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
acyl carrier protein
L3_063_052G1_scaffold_474_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10779..12269)
DNA (1491bp) protein (497aa)
Acyl-CoA synthetase n=2 Tax=Clostridium perfringens RepID=B1BUL5_CLOPF
Acyl-CoA synthetase {ECO:0000313|EMBL:EDT14600.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_063_052G1_scaffold_474_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12266..13309)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUL6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14618.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_063_052G1_scaffold_474_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13315..14301)
DNA (987bp) protein (329aa)
ATPase component n=2 Tax=Clostridium perfringens RepID=B1BUL7_CLOPF
ATPase component {ECO:0000313|EMBL:EDT14588.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter ATPase
L3_063_052G1_scaffold_474_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14304..15098)
DNA (795bp) protein (265aa)
Permease component n=2 Tax=Clostridium perfringens RepID=B1BUL8_CLOPF
Permease component {ECO:0000313|EMBL:EDT14577.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_063_052G1_scaffold_474_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15100..15903)
DNA (804bp) protein (268aa)
Permease component n=2 Tax=Clostridium perfringens RepID=B1BUL9_CLOPF
Permease component {ECO:0000313|EMBL:EDT14591.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_063_052G1_scaffold_474_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15920..16507)
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BUM0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14615.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_063_052G1_scaffold_474_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16739..17689)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens RepID=Q2L5Q6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:BAE79084.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
hypothetical protein
L3_063_052G1_scaffold_474_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17722..20289)
DNA (2568bp) protein (856aa)
PdpB n=2 Tax=Clostridium perfringens RepID=B1BUM1_CLOPF
PdpB {ECO:0000313|EMBL:EDT14563.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
PdpB protein
L3_063_052G1_scaffold_474_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20301..20579)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BUM2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14607.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_063_052G1_scaffold_474_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21150..21932)
DNA (783bp) protein (261aa)
Histidinol phosphatase n=2 Tax=Clostridium perfringens RepID=B1BUM3_CLOPF
Histidinol phosphatase {ECO:0000313|EMBL:BAE79087.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
hisB; histidinol phosphatase
L3_063_052G1_scaffold_474_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22096..22185)
DNA (90bp) protein (30aa)
ISCpe3, transposase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SV93_CLOPS
ISCpe3, transposase
ISCpe3, transposase {ECO:0000313|EMBL:ABG87231.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_063_052G1_scaffold_474_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22316..22810)
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BUM4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:BAE79088.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
hypothetical protein
L3_063_052G1_scaffold_474_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22876..23103)
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BUM5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:BAE79089.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
hypothetical protein
L3_063_052G1_scaffold_474_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23389..23919)
DNA (531bp) protein (177aa)
LexA repressor n=2 Tax=Clostridium perfringens RepID=B1BUM6_CLOPF
LexA repressor {ECO:0000313|EMBL:BAE79090.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
lexa repressor
Displaying 26 items

View Taxonomy