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L3_063_052G1_scaffold_475

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_475_1
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(346..2286)
DNA (1941bp) protein (647aa)
Regulatory protein CsrD n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5M0_ESCHE
Enterobacter aerogenes strain DDE1 c4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31516.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
regulatory protein CsrD
L3_063_052G1_scaffold_475_2
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2508..3482
DNA (975bp) protein (325aa)
Putative quinone oxidoreductase YhdH n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5M1_ESCHE
Putative quinone oxidoreductase YhdH {ECO:0000313|EMBL:GAB53279.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
zinc-binding dehydrogenase
L3_063_052G1_scaffold_475_3
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3586..4590
DNA (1005bp) protein (335aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
Sulfoxide reductase catalytic subunit YedY n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5M2_ESCHE
TMAO/DMSO reductase
L3_063_052G1_scaffold_475_4
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4591..5190
DNA (600bp) protein (200aa)
Sulfoxide reductase heme-binding subunit YedZ n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5M3_ESCHE
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
sulfite oxidase subunit YedZ
L3_063_052G1_scaffold_475_5
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5425..5877
DNA (453bp) protein (151aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
3-dehydroquinate dehydratase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5M4_ESCHE
aroQ; 3-dehydroquinate dehydratase
L3_063_052G1_scaffold_475_6
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5899..6375
DNA (477bp) protein (159aa)
accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit (EC:6.4.1.2)
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5M5_ESCHE
Acetyl-CoA carboxylase biotin carboxyl carrier protein {ECO:0000313|EMBL:GAB53283.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L3_063_052G1_scaffold_475_7
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6386..7735
DNA (1350bp) protein (450aa)
acetyl-CoA carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5M6_ESCHE
Biotin carboxylase {ECO:0000313|EMBL:KDF12427.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
L3_063_052G1_scaffold_475_8
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7836..8078
DNA (243bp) protein (81aa)
Putative uncharacterized protein yhdT n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5M7_ESCHE
Putative uncharacterized protein yhdT {ECO:0000313|EMBL:GAB53285.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_063_052G1_scaffold_475_9
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8068..9522
DNA (1455bp) protein (485aa)
Sodium/pantothenate symporter n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5M8_ESCHE
PanF protein {ECO:0000313|EMBL:KIU31508.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
panF; sodium/panthothenate symporter
L3_063_052G1_scaffold_475_10
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9534..10415
DNA (882bp) protein (294aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
Ribosomal protein L11 methyltransferase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5M9_ESCHE
ribosomal protein L11 methyltransferase
L3_063_052G1_scaffold_475_11
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10563..11303
DNA (741bp) protein (247aa)
Putative carbonic anhydrase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5N0_ESCHE
Enterobacter aerogenes strain DDE1 c4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31506.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
cah protein
L3_063_052G1_scaffold_475_12
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11682..12641
DNA (960bp) protein (320aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
tRNA-dihydrouridine synthase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5N1_ESCHE
tRNA-dihydrouridine synthase B
L3_063_052G1_scaffold_475_13
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12745..13041
DNA (297bp) protein (99aa)
DNA-binding protein Fis n=2250 Tax=Bacteria RepID=FIS_CITK8
fis; Fis family transcriptional regulator
DNA-binding protein Fis {ECO:0000256|HAMAP-Rule:MF_00166, ECO:0000256|SAAS:SAAS00253269}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE52.;"
L3_063_052G1_scaffold_475_14
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13111..13761)
DNA (651bp) protein (217aa)
Putative acrEF/envCD operon repressor n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5N3_ESCHE
Putative acrEF/envCD operon repressor {ECO:0000313|EMBL:GAB53291.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
DNA-binding transcriptional regulator EnvR
L3_063_052G1_scaffold_475_15
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14158..15330
DNA (1173bp) protein (391aa)
Acriflavine resistance protein AcrE n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5N4_ESCHE
Enterobacter aerogenes strain DDE1 c4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31502.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
acrE; acriflavin resistance protein E
L3_063_052G1_scaffold_475_16
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15323..18430
DNA (3108bp) protein (1036aa)
Acriflavine resistance protein AcrF n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5N5_ESCHE
Enterobacter aerogenes strain DDE1 c4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31501.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
L3_063_052G1_scaffold_475_17
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18715..18936
DNA (222bp) protein (74aa)
Putative uncharacterized protein yhdV n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5N6_ESCHE
Putative uncharacterized protein yhdV {ECO:0000313|EMBL:GAB53294.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_063_052G1_scaffold_475_18
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19421..20446
DNA (1026bp) protein (342aa)
Putative amino acid ABC transporter substrate binding protein YhdW n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5N7_ESCHE
Putative amino acid ABC transporter substrate binding protein YhdW {ECO:0000313|EMBL:GAB53295.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
amino acid ABC transporter substrate-binding protein
L3_063_052G1_scaffold_475_19
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20520..21701
DNA (1182bp) protein (394aa)
Putative amino acid ABC transporter permease protein YhdX n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5N8_ESCHE
Enterobacter aerogenes strain DDE1 c4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31498.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_052G1_scaffold_475_20
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21712..22815
DNA (1104bp) protein (368aa)
Putative amino acid ABC transporter permease protein YhdY n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5N9_ESCHE
Putative amino acid ABC transporter permease protein YhdY {ECO:0000313|EMBL:GAB53297.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_063_052G1_scaffold_475_21
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22824..23582
DNA (759bp) protein (253aa)
Putative amino acid ABC transporter ATP-binding protein YhdZ n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5P0_ESCHE
Putative amino acid ABC transporter ATP-binding protein YhdZ {ECO:0000313|EMBL:GAB53298.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
amino acid ABC transporter ATP-binding protein
Displaying 21 items

View Taxonomy