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L3_063_052G1_scaffold_518

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_518_1

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2..115
DNA (114bp) protein (38aa)
Flagellar biosynthesis anti-sigma factor FlgM n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YV67_CLOBU
Regulator of flagellin synthesis, flgm {ECO:0000313|EMBL:ETJ19563.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
anti-sigma-28 factor, FlgM
L3_063_052G1_scaffold_518_2

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118..528
DNA (411bp) protein (137aa)
FlgN family protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9X7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ19564.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_063_052G1_scaffold_518_3

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573..2396
DNA (1824bp) protein (608aa)
Flagellar hook-associated protein FlgK n=2 Tax=Clostridium botulinum B RepID=B2TLR4_CLOBB
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:ETJ19565.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
flgK; flagellar hook-associated protein FlgK
L3_063_052G1_scaffold_518_4

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2443..3681
DNA (1239bp) protein (413aa)
Flagellar hook-associated protein 3 n=2 Tax=Clostridium botulinum E RepID=B2V1Z6_CLOBA
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:ETJ19566.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
flgL; flagellar hook-associated protein 3
L3_063_052G1_scaffold_518_5

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3694..4122
DNA (429bp) protein (143aa)
Flagellar assembly factor FliW n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MUH5_9CLOT
Flagellar assembly factor FliW {ECO:0000313|EMBL:ETJ19567.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
fliW; flagellar assembly factor FliW
L3_063_052G1_scaffold_518_6

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4124..4339
DNA (216bp) protein (72aa)
Carbon storage regulator homolog n=2 Tax=Clostridium butyricum RepID=M8K2M1_CLOBU
Carbon storage regulator-like protein {ECO:0000313|EMBL:ETJ19568.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
carbon storage regulator CsrA
L3_063_052G1_scaffold_518_7

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4363..4740
DNA (378bp) protein (126aa)
FlaG family protein n=2 Tax=Clostridium botulinum E RepID=B2V1Z9_CLOBA
FlaG family protein {ECO:0000313|EMBL:ETJ19569.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
flaG family protein
L3_063_052G1_scaffold_518_8

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4813..5103
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZK4_CLOSA
Uncharacterized protein {ECO:0000313|EMBL:ETJ19570.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_063_052G1_scaffold_518_9

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5115..5492
DNA (378bp) protein (126aa)
flagellar biosynthesis protein FliS n=1 Tax=Clostridium botulinum RepID=UPI0003603FDA
Flagellar protein FliS {ECO:0000313|EMBL:ETJ19571.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
fliS; flagellar protein FliS
L3_063_052G1_scaffold_518_10

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5506..7542
DNA (2037bp) protein (679aa)
Flagellar cap protein FliD n=2 Tax=Clostridium botulinum B RepID=B2TLS1_CLOBB
Flagellar cap protein FliD {ECO:0000313|EMBL:ETJ19572.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
flagellar cap protein FliD
L3_063_052G1_scaffold_518_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7547..7873
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00037C5715
Uncharacterized protein {ECO:0000313|EMBL:EEH98378.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_063_052G1_scaffold_518_12

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7892..8074
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TLS3_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:ETJ19573.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_063_052G1_scaffold_518_13
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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8291..9556
DNA (1266bp) protein (422aa)
Flagellin n=1 Tax=Clostridium chauvoei RepID=Q9F4A4_9CLOT
Flagellin {ECO:0000313|EMBL:EYE88780.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
flagellin domain-containing protein
L3_063_052G1_scaffold_518_14
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9681..11396
DNA (1716bp) protein (572aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V208_CLOBA
Uncharacterized protein {ECO:0000313|EMBL:EYE88820.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
hypothetical protein
L3_063_052G1_scaffold_518_15
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11396..11752
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:EYE88821.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
hypothetical protein
L3_063_052G1_scaffold_518_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11911..12903
DNA (993bp) protein (331aa)
NAD-dependent dehydratase n=1 Tax=Clostridium beijerinckii RepID=UPI000316128C
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS24517.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.;"
UDP-glucose 4-epimerase
L3_063_052G1_scaffold_518_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12896..14131
DNA (1236bp) protein (412aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=2 Tax=Clostridium butyricum RepID=B1QX93_CLOBU
Aminotransferase DegT {ECO:0000313|EMBL:KHD15808.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
DegT/DnrJ/EryC1/StrS aminotransferase
L3_063_052G1_scaffold_518_18
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

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14106..15503
DNA (1398bp) protein (466aa)
radical SAM protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E34D
cobalamin-binding radical SAM protein
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
L3_063_052G1_scaffold_518_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15530..16570
DNA (1041bp) protein (347aa)
Nucleotidyl transferase n=2 Tax=Clostridium butyricum RepID=B1QX92_CLOBU
Nucleotidyltransferase {ECO:0000313|EMBL:KHD15807.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
nucleotidyl transferase
L3_063_052G1_scaffold_518_20
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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16570..17211
DNA (642bp) protein (214aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JT45_CELLD
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family {ECO:0000313|EMBL:ADZ85264.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_063_052G1_scaffold_518_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17208..18206
DNA (999bp) protein (333aa)
N-acetylneuraminate synthase {ECO:0000313|EMBL:EEP55556.1}; EC=2.5.1.56 {ECO:0000313|EMBL:EEP55556.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
N-acetylneuraminate synthase (EC:2.5.1.56)
Spore coat polysaccharide biosynthesis protein SpsE n=2 Tax=Clostridium butyricum RepID=B1QX90_CLOBU
L3_063_052G1_scaffold_518_22
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18203..19360
DNA (1158bp) protein (386aa)
GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase {ECO:0000313|EMBL:KDR94765.1}; EC=3.2.1.184 {ECO:0000313|EMBL:KDR94765.1};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
UDP-N-acetyl-D-glucosamine 2-epimerase (EC:5.1.3.14)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N5Q9_9CLOT
L3_063_052G1_scaffold_518_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19350..20078
DNA (729bp) protein (243aa)
N-acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:EEP55115.1}; EC=2.7.7.43 {ECO:0000313|EMBL:EEP55115.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00036DBD13
acylneuraminate cytidylyltransferase
L3_063_052G1_scaffold_518_24

Not on your lists

20586..21404
DNA (819bp) protein (273aa)
flagellin n=1 Tax=Clostridium botulinum RepID=UPI0003792B46
Flagellin {ECO:0000313|EMBL:ETJ38227.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
flagellin
L3_063_052G1_scaffold_518_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22039..22488
DNA (450bp) protein (150aa)
Flagellar basal body rod protein FlgB n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YV52_CLOBU
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
flgB; flagellar basal body rod protein FlgB
L3_063_052G1_scaffold_518_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22502..22909
DNA (408bp) protein (136aa)
Flagellar basal-body rod protein FlgC n=2 Tax=Clostridium butyricum RepID=B1QX65_CLOBU
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
flgC; flagellar basal-body rod protein FlgC
L3_063_052G1_scaffold_518_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22924..23229
DNA (306bp) protein (102aa)
Flagellar hook-basal body complex protein FliE n=2 Tax=Clostridium butyricum RepID=B1QX64_CLOBU
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
fliE; flagellar hook-basal body complex protein FliE
Displaying 27 items

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