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L3_063_052G1_scaffold_533

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_533_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23..433
DNA (411bp) protein (137aa)
Thioesterase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQM1_CLOPF
Thioesterase family protein {ECO:0000313|EMBL:EDS80009.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
thioesterase
L3_063_052G1_scaffold_533_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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718..2028
DNA (1311bp) protein (437aa)
Uracil permease n=5 Tax=Clostridium perfringens RepID=H7CVP6_CLOPF
uraA; uracil permease
Uracil-xanthine permease {ECO:0000313|EMBL:EDT27494.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_063_052G1_scaffold_533_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2217..3614
DNA (1398bp) protein (466aa)
Putative dipeptidase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR74_CLOP1
dipeptidase PepV
Putative dipeptidase {ECO:0000313|EMBL:EDT15715.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_063_052G1_scaffold_533_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3692..4129)
DNA (438bp) protein (146aa)
FUR family transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CVP4_CLOPF
fur-3; FUR family transcriptional regulator
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDT27583.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_063_052G1_scaffold_533_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4730..5065
DNA (336bp) protein (112aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CVP3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27527.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_063_052G1_scaffold_533_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5095..5271
DNA (177bp) protein (59aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CVP2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17360.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_533_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5325..6797)
DNA (1473bp) protein (491aa)
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Nicotinate phosphoribosyltransferase n=3 Tax=Clostridium perfringens RepID=Q0TR78_CLOP1
L3_063_052G1_scaffold_533_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6950..8944
DNA (1995bp) protein (665aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR79_CLOP1
ATP-dependent DNA helicase PcrA
L3_063_052G1_scaffold_533_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9150..10346
DNA (1197bp) protein (399aa)
Amidohydrolase family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STL0_CLOPS
amidohydrolase
Amidohydrolase family protein {ECO:0000313|EMBL:ABG87669.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_063_052G1_scaffold_533_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10406..11380
DNA (975bp) protein (325aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Pseudouridine synthase n=5 Tax=Clostridium perfringens RepID=H7CVN8_CLOPF
RluA family pseudouridine synthase
L3_063_052G1_scaffold_533_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11402..13018
DNA (1617bp) protein (539aa)
Stage V sporulation protein B n=5 Tax=Clostridium perfringens RepID=Q0TR82_CLOP1
spoVB; stage V sporulation protein B
Spore cortex protein {ECO:0000313|EMBL:BAB80909.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_533_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13063..15669)
DNA (2607bp) protein (869aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR83_CLOP1
ATPase P
Probable calcium-transporting ATPase {ECO:0000313|EMBL:BAB80908.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_533_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15932..16843
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR84_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17353.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_052G1_scaffold_533_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16845..17951
DNA (1107bp) protein (369aa)
Mucin-desulfating sulfatase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR85_CLOP1
MdsC protein
MdsC protein {ECO:0000313|EMBL:EDT71052.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_063_052G1_scaffold_533_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18113..19507
DNA (1395bp) protein (465aa)
MATE efflux family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKU1_CLOPF
MATE efflux family protein {ECO:0000313|EMBL:EDS79574.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
MATE efflux family protein
L3_063_052G1_scaffold_533_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19609..20913
DNA (1305bp) protein (435aa)
Putative ATP-dependent helicase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR87_CLOP1
ATP-dependent helicase
Putative ATP-dependent helicase {ECO:0000313|EMBL:EIA17350.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 16 items

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