ggKbase home page

L3_063_052G1_scaffold_536

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_536_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..924
DNA (924bp) protein (308aa)
SIR2 family protein (EC:2.4.2.31)
SIR2 family protein n=2 Tax=Bifidobacterium dentium RepID=D2Q7L2_BIFDB
Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:ETO97574.1}; Flags: Fragment;; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_063_052G1_scaffold_536_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1253..2560)
DNA (1308bp) protein (436aa)
tdcB; TdcB Threonine dehydratase (EC:4.3.1.19)
TdcB Threonine dehydratase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q7L3_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28081.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_063_052G1_scaffold_536_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2687..4507)
DNA (1821bp) protein (607aa)
Oligo-1,6-glucosidase 1 {ECO:0000313|EMBL:ETO97556.1}; EC=3.2.1.10 {ECO:0000313|EMBL:ETO97556.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Oligo-1,6-glucosidase (EC:3.2.1.54)
Alpha amylase, catalytic domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QA36_9BIFI
L3_063_052G1_scaffold_536_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4625..4861)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S9Q0_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB10777.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_063_052G1_scaffold_536_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5254..6129)
DNA (876bp) protein (292aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0QA30_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EFM40622.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
raffinose transporter permease
L3_063_052G1_scaffold_536_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6150..7064)
DNA (915bp) protein (305aa)
Raffinose transport system permease protein n=2 Tax=Bifidobacterium dentium RepID=D2Q7L8_BIFDB
raffinose transporter permease
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28086.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_063_052G1_scaffold_536_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7079..8371)
DNA (1293bp) protein (431aa)
Raffinose-binding protein n=4 Tax=Bifidobacterium dentium RepID=D2Q7L9_BIFDB
raffinose-binding protein
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFM40620.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_063_052G1_scaffold_536_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8554..9756
DNA (1203bp) protein (401aa)
transcriptional repressor, ROK family (EC:2.7.1.4)
Transcriptional repressor, ROK family n=4 Tax=Bifidobacterium dentium RepID=D2Q7M0_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28088.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_063_052G1_scaffold_536_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10205..12499)
DNA (2295bp) protein (765aa)
aga; alpha-galactosidase (EC:3.2.1.22)
Aga Alpha-galactosidase n=2 Tax=Bifidobacterium dentium RepID=D2Q7M1_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28089.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_063_052G1_scaffold_536_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12657..13112)
DNA (456bp) protein (152aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
mesJ; tRNA-specific adenosine deaminase (EC:3.5.4.3)
MesJ tRNA-specific adenosine deaminase n=4 Tax=Bifidobacterium dentium RepID=D2Q7M2_BIFDB
L3_063_052G1_scaffold_536_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13194..15266
DNA (2073bp) protein (691aa)
Na+/H+ antiporter n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9J3_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28091.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
nhaP; NhaP Na+/H+ antiporter nhaP
L3_063_052G1_scaffold_536_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15555..16313
DNA (759bp) protein (253aa)
Phospholipase/carboxylesterase n=4 Tax=Bifidobacterium dentium RepID=D2Q7M4_BIFDB
phospholipase/carboxylesterase
Phospholipase/carboxylesterase {ECO:0000313|EMBL:ADB10786.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_063_052G1_scaffold_536_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16424..17005
DNA (582bp) protein (194aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Deoxycytidine triphosphate deaminase n=4 Tax=Bifidobacterium dentium RepID=D2Q7M5_BIFDB
L3_063_052G1_scaffold_536_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17159..20149)
DNA (2991bp) protein (997aa)
pacL2; PacL2 Calcium-transporting ATPase (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase, PMCA-type n=2 Tax=Bifidobacterium dentium RepID=E0QA20_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28094.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_063_052G1_scaffold_536_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20563..20685
DNA (123bp) protein (41aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S9I7_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28095.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Displaying 15 items

View Taxonomy