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L3_063_052G1_scaffold_557

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_557_1
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..971)
DNA (969bp) protein (323aa)
Flagellar hook-associated protein FlgK n=1 Tax=Clostridium colicanis 209318 RepID=N9Y297_9CLOT
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:ENZ02284.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
flagellar hook-associated protein FlgK
L3_063_052G1_scaffold_557_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(983..1393)
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TLR3_CLOBB
hypothetical protein
FlgN family protein {ECO:0000313|EMBL:AIY81186.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_063_052G1_scaffold_557_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1386..1670)
DNA (285bp) protein (95aa)
anti-sigma-28 factor FlgM n=1 Tax=Clostridium botulinum RepID=UPI00037338AB
negative regulator of flagellin synthesis
Flagellar biosynthesis anti-sigma factor FlgM {ECO:0000313|EMBL:KIL09012.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_063_052G1_scaffold_557_4
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1823..2980)
DNA (1158bp) protein (386aa)
Flagellar motor switch protein n=1 Tax=Clostridium intestinale URNW RepID=U2NSW1_9CLOT
Flagellar motor switch protein {ECO:0000313|EMBL:ERK31951.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
flagellar motor switch protein
L3_063_052G1_scaffold_557_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2967..3962)
DNA (996bp) protein (332aa)
Flagellar motor switch protein FliM n=2 Tax=Clostridium botulinum B RepID=B2TLR0_CLOBB
fliM; flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000313|EMBL:ACD22898.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_063_052G1_scaffold_557_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3978..4376)
DNA (399bp) protein (133aa)
Putative CheW protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1D4_CLOB8
putative CheW protein
Putative CheW protein {ECO:0000313|EMBL:ABR36414.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_063_052G1_scaffold_557_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4403..4765)
DNA (363bp) protein (121aa)
Chemotaxis protein CheY n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWP3_CLOSA
cheY6; chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:AGX44938.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_063_052G1_scaffold_557_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4782..5381)
DNA (600bp) protein (200aa)
Chemotaxis protein CheC n=2 Tax=Clostridium butyricum RepID=M8JG02_CLOBU
Chemotaxis protein CheY {ECO:0000313|EMBL:KHD15827.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
chemotaxis protein CheC
L3_063_052G1_scaffold_557_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5403..7388)
DNA (1986bp) protein (662aa)
chemotaxis protein CheA (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
Chemotaxis protein CheA n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V1Y7_CLOBA
L3_063_052G1_scaffold_557_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7402..8169)
DNA (768bp) protein (256aa)
cheR; CheR methyltransferase, SAM binding domain (EC:2.1.1.80)
Chemotaxis protein methyltransferase, CheR n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V1Y6_CLOBA
Chemotaxis protein CheR {ECO:0000313|EMBL:KIL09005.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_063_052G1_scaffold_557_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8243..8731)
DNA (489bp) protein (163aa)
cheD; chemoreceptor glutamine deamidase CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWP6_CLOSA
L3_063_052G1_scaffold_557_12
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8740..9192)
DNA (453bp) protein (151aa)
Chemotaxis protein chew n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MUI9_9CLOT
cheW; chemotaxis protein chew
Chemotaxis protein chew {ECO:0000313|EMBL:AGF58346.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_063_052G1_scaffold_557_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9202..11100)
DNA (1899bp) protein (633aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V1Y2_CLOBA
hypothetical protein
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:KIL09002.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_063_052G1_scaffold_557_14
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11175..11978)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002FC5FD7
Aminotransferase, class IV {ECO:0000313|EMBL:AJH01366.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
class IV aminotransferase
L3_063_052G1_scaffold_557_15
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11993..12631)
DNA (639bp) protein (213aa)
HAD-superfamily subfamily IB hydrolase n=1 Tax=Clostridium sp. CAG:221 RepID=R6GKV5_9CLOT
HAD-superfamily subfamily IB hydrolase {ECO:0000313|EMBL:CDB14812.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
HAD family hydrolase
L3_063_052G1_scaffold_557_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12707..13900)
DNA (1194bp) protein (398aa)
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V1X9_CLOBA
Aspartate aminotransferase {ECO:0000313|EMBL:KIL08999.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_063_052G1_scaffold_557_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13915..14739)
DNA (825bp) protein (275aa)
PHP domain-containing protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BSY3_9CLOT
PHP domain-containing protein {ECO:0000313|EMBL:EOR20178.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
PHP domain protein
L3_063_052G1_scaffold_557_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14898..15224)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V1X8_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08998.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_063_052G1_scaffold_557_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15483..18995)
DNA (3513bp) protein (1171aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
nifJ2; pyruvate-flavodoxin oxidoreductase NifJ (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase NifJ n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWJ2_CLOSA
L3_063_052G1_scaffold_557_20
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19463..20194)
DNA (732bp) protein (244aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUU0_9CLOT
Displaying 20 items

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