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L3_063_052G1_scaffold_565

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_565_1
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..201)
DNA (201bp) protein (67aa)
Preprotein translocase, SecG subunit n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FQG7_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ETJ14522.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
preprotein translocase subunit SecG
L3_063_052G1_scaffold_565_2
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(198..872)
DNA (675bp) protein (225aa)
RNA polymerase sigma-H factor n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KN58_9FIRM
RNA polymerase sigma-H factor {ECO:0000313|EMBL:EFG25535.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_063_052G1_scaffold_565_3
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(946..1479)
DNA (534bp) protein (178aa)
Tetracycline resistance protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KN59_9FIRM
Tetracycline resistance protein {ECO:0000313|EMBL:EFG25536.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
hypothetical protein
L3_063_052G1_scaffold_565_4
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1482..2213)
DNA (732bp) protein (244aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KN60_9FIRM
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EFG25537.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
TrmH family RNA methyltransferase
L3_063_052G1_scaffold_565_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2215..2709)
DNA (495bp) protein (165aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Mini-ribonuclease 3 n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMT8_VEIPT
ribonuclease III
L3_063_052G1_scaffold_565_6
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2681..4129)
DNA (1449bp) protein (483aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Cysteine--tRNA ligase n=2 Tax=Veillonella RepID=D1YRH7_9FIRM
cysteinyl-tRNA synthetase
L3_063_052G1_scaffold_565_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4626..5597)
DNA (972bp) protein (324aa)
Sodium/bile acid symporter family protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KI07_9FIRM
Bile acid transporter {ECO:0000313|EMBL:ETI97269.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
sodium symporter
L3_063_052G1_scaffold_565_8
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5716..7185)
DNA (1470bp) protein (490aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Glutamate--tRNA ligase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KI08_9FIRM
glutamyl-tRNA synthetase
L3_063_052G1_scaffold_565_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7188..8363)
DNA (1176bp) protein (392aa)
Bifunctional enzyme IspD/IspF n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMU2_VEIPT
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_063_052G1_scaffold_565_10
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8347..9498)
DNA (1152bp) protein (384aa)
PilT protein domain protein n=7 Tax=Veillonella RepID=D1BMU3_VEIPT
PilT protein domain-containing protein
PIN/TRAM domain protein {ECO:0000313|EMBL:EFG25543.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
L3_063_052G1_scaffold_565_11
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9514..10887)
DNA (1374bp) protein (458aa)
DNA repair protein radA n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KN67_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
DNA repair protein RadA
L3_063_052G1_scaffold_565_12
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11052..13499)
DNA (2448bp) protein (816aa)
Negative regulator of genetic competence ClpC/MecB n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KN68_9FIRM
Negative regulator of genetic competence ClpC/MecB {ECO:0000313|EMBL:EFG25545.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
ATPase AAA
L3_063_052G1_scaffold_565_13
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13734..14795)
DNA (1062bp) protein (354aa)
Putative ATP:guanido phosphotransferase HMPREF0874_00394 n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KN69_9FIRM
ATP:guanido phosphotransferase domain protein {ECO:0000313|EMBL:EFG25546.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
ATP:guanido phosphotransferase
L3_063_052G1_scaffold_565_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14805..15344)
DNA (540bp) protein (180aa)
UvrB/UvrC protein n=2 Tax=Veillonella RepID=D1BMU7_VEIPT
UvrB/UvrC protein
UvrB/UvrC protein {ECO:0000313|EMBL:ACZ24704.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_063_052G1_scaffold_565_15
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15351..15830)
DNA (480bp) protein (160aa)
Transcriptional regulator CtsR n=6 Tax=Veillonella RepID=D1BMU8_VEIPT
CtsR family transcriptional regulator
Transcriptional regulator CtsR {ECO:0000313|EMBL:EFG25548.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
L3_063_052G1_scaffold_565_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16044..16550
DNA (507bp) protein (169aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
S-adenosylmethionine decarboxylase related protein n=3 Tax=Veillonella RepID=D1BMU9_VEIPT
S-adenosylmethionine decarboxylase-like protein
L3_063_052G1_scaffold_565_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16631..17314)
DNA (684bp) protein (228aa)
Phosphoglycolate phosphatase n=4 Tax=Veillonella RepID=T0SWF7_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EGL77724.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
haloacid dehalogenase
L3_063_052G1_scaffold_565_18
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17316..17741)
DNA (426bp) protein (142aa)
SUF system FeS assembly protein, NifU family n=5 Tax=Veillonella RepID=D1YRI9_9FIRM
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:ETI97280.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
NifU family SUF system FeS assembly protein
L3_063_052G1_scaffold_565_19
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17756..18985)
DNA (1230bp) protein (410aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Cysteine desulfurase n=5 Tax=Veillonella RepID=D1BMV2_VEIPT
SufS subfamily cysteine desulfurase
Displaying 19 items

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