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L3_063_052G1_scaffold_569

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_569_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..156)
DNA (156bp) protein (52aa)
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNG3_CLOPF
L3_063_052G1_scaffold_569_2
Paenibacillus graminis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(755..2221)
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002FE898E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ70690.1}; TaxID=189425 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus graminis.;"
L3_063_052G1_scaffold_569_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2226..2921)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Bacillus sp. 123MFChir2 RepID=UPI00035F1CF4
acetyltransferase (isoleucine patch superfamily)-like protein
Acetyltransferase (Isoleucine patch superfamily)-like protein {ECO:0000313|EMBL:ADB36783.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
L3_063_052G1_scaffold_569_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2935..4056)
DNA (1122bp) protein (374aa)
glycosyl transferase group 1 n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CC27
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EYB08207.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
cps2I; hypothetical protein
L3_063_052G1_scaffold_569_5
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4053..5261)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LDL2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83895.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
L3_063_052G1_scaffold_569_6
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5272..6021)
DNA (750bp) protein (250aa)
Glycosyl transferase family 2 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPW5_METZD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEH61486.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5); (Methanohalophilus zhilinae).;"
L3_063_052G1_scaffold_569_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6014..7129)
DNA (1116bp) protein (372aa)
Glycosyltransferase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLJ9_9FIRM
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBL07751.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_063_052G1_scaffold_569_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7157..8323)
DNA (1167bp) protein (389aa)
Putative transferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG45_9CLOT
Putative transferase {ECO:0000313|EMBL:EOR28258.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
glycosyl transferase family 1
L3_063_052G1_scaffold_569_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8334..9062)
DNA (729bp) protein (243aa)
bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family (EC:2.4.1.187 2.4.1.-)
Bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family {ECO:0000313|EMBL:CBL25528.1}; EC=2.4.1.- {ECO:0000313|EMBL:CBL25528.1};; EC=2.4.1.187 {ECO:0000313|EMBL:CBL25528.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2R6_9FIRM
L3_063_052G1_scaffold_569_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9083..10009)
DNA (927bp) protein (309aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
GDP-L-fucose synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENK2_9CLOT
nad-dependent epimerase/dehydratase
L3_063_052G1_scaffold_569_11
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10027..11097)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FJL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG00859.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
L3_063_052G1_scaffold_569_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11097..12188)
DNA (1092bp) protein (364aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
GDP-mannose 4,6-dehydratase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGW7_9CLOT
GDP-mannose 4,6-dehydratase
L3_063_052G1_scaffold_569_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12238..13284)
DNA (1047bp) protein (349aa)
Probable mannose-1-phosphate guanylyltransferase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN43_CLOPE
mannose-1-phosphate guanylyltransferase
Probable mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:BAB80201.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_569_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13301..14647)
DNA (1347bp) protein (449aa)
NDP-sugar dehydrogenase n=1 Tax=Clostridium perfringens F262 RepID=H7CST0_CLOPF
NDP-sugar dehydrogenase {ECO:0000313|EMBL:EIA18224.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NDP-suger dehydrogenase
L3_063_052G1_scaffold_569_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14668..15336)
DNA (669bp) protein (223aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTW7_CLOP1
capsular polysaccharide biosynthesis protein
Capsular polysaccharide biosynthsis protein {ECO:0000313|EMBL:BAB80199.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_569_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15536..16189)
DNA (654bp) protein (218aa)
Capsular polysaccharide biosynthsis protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN46_CLOPE
capsular polysaccharide biosynthsis protein
Capsular polysaccharide biosynthsis protein {ECO:0000313|EMBL:BAB80198.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_569_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16203..16901)
DNA (699bp) protein (233aa)
Capsular polysaccharide biosynthsis protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN47_CLOPE
capsular polysaccharide biosynthsis protein
Capsular polysaccharide biosynthsis protein {ECO:0000313|EMBL:BAB80197.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_063_052G1_scaffold_569_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17390..17905)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDG1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27917.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_063_052G1_scaffold_569_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18623..18940)
DNA (318bp) protein (106aa)
Putative membrane protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3X8_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT25009.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
Displaying 19 items

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