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L3_063_052G1_scaffold_613

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_613_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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298..1287
DNA (990bp) protein (330aa)
spoU; SpoU rRNA methylase family protein (EC:2.1.1.34)
SpoU rRNA methylase family protein n=2 Tax=Bifidobacterium dentium RepID=D2Q7M8_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28096.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_063_052G1_scaffold_613_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1363..2775)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QA17_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40609.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_063_052G1_scaffold_613_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3000..4127)
DNA (1128bp) protein (376aa)
ABC transporter ATP-binding protein (EC:3.6.3.20)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9I3_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO97569.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_063_052G1_scaffold_613_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4448..5164
DNA (717bp) protein (239aa)
LytTr DNA-binding domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9I2_9BIFI
LytTr DNA-binding domain protein {ECO:0000313|EMBL:ETO97577.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
virR; two-component response regulator VirR
L3_063_052G1_scaffold_613_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5161..6534
DNA (1374bp) protein (458aa)
VirS Two-component sensor kinase n=2 Tax=Bifidobacterium dentium RepID=D2Q7Z2_BIFDB
GHKL domain protein {ECO:0000313|EMBL:ETO97568.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
virS; two-component sensor kinase virS
L3_063_052G1_scaffold_613_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6708..7115
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0QA12_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40604.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_063_052G1_scaffold_613_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7042..8430)
DNA (1389bp) protein (463aa)
Chloride channel protein n=2 Tax=Bifidobacterium dentium RepID=D2Q7Z3_BIFDB
chloride channel protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28102.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_063_052G1_scaffold_613_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8519..10150)
DNA (1632bp) protein (544aa)
gatA; aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit A (EC:3.5.1.4)
Amidase n=2 Tax=Bifidobacterium dentium RepID=E1N7P4_9BIFI
Amidase {ECO:0000313|EMBL:ETO97565.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_063_052G1_scaffold_613_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10147..10950)
DNA (804bp) protein (268aa)
ABC transporter ATP-binding protein (EC:3.6.3.20)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0QA09_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO97575.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_063_052G1_scaffold_613_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10970..11791)
DNA (822bp) protein (274aa)
Permease protein of ABC transporter system n=4 Tax=Bifidobacterium dentium RepID=D2Q7Z6_BIFDB
ABC transporter permease
Permease protein of ABC transporter system {ECO:0000313|EMBL:ADB10798.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_063_052G1_scaffold_613_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11825..12805)
DNA (981bp) protein (327aa)
NMT1/THI5-like protein n=2 Tax=Bifidobacterium dentium RepID=E0QA07_9BIFI
NMT1/THI5-like protein {ECO:0000313|EMBL:ETO97563.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
twin-arginine translocation pathway signal
L3_063_052G1_scaffold_613_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12867..13901)
DNA (1035bp) protein (345aa)
acetamidase/Formamidase (EC:3.5.1.49)
Acetamidase/Formamidase family protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0QA06_9BIFI
Acetamidase/Formamidase family protein {ECO:0000313|EMBL:EFM40598.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_063_052G1_scaffold_613_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14203..14820
DNA (618bp) protein (206aa)
Transcriptional regulator, GntR family n=2 Tax=Bifidobacterium dentium RepID=E0QA05_9BIFI
FCD domain protein {ECO:0000313|EMBL:ETO97551.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
GntR family transcriptional regulator
L3_063_052G1_scaffold_613_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14910..15542
DNA (633bp) protein (211aa)
lacA; galactoside O-acetyltransferase (EC:2.3.1.18)
LacA Galactoside O-acetyltransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q800_BIFDB
Maltose acetyltransferase {ECO:0000313|EMBL:ETO97584.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_063_052G1_scaffold_613_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15698..16894
DNA (1197bp) protein (399aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:ETO97582.1}; EC=2.6.1.- {ECO:0000313|EMBL:ETO97582.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
aspC; aspartate aminotransferase (EC:4.4.1.14)
Aminotransferase, class I/II n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9H2_9BIFI
L3_063_052G1_scaffold_613_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17276..17479)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6I2_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82781.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_063_052G1_scaffold_613_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17805..18182
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QA02_9BIFI
Esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:AJE06746.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_063_052G1_scaffold_613_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18203..19444
DNA (1242bp) protein (414aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium dentium RepID=E0QA01_9BIFI
Transporter, major facilitator family protein {ECO:0000313|EMBL:ETO97580.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Permease
L3_063_052G1_scaffold_613_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19441..20412)
DNA (972bp) protein (324aa)
Putative sugar-binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QA00_9BIFI
Sugar-binding domain protein {ECO:0000313|EMBL:ETO97547.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
transcriptional regulator
L3_063_052G1_scaffold_613_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20652..22577
DNA (1926bp) protein (642aa)
Uncharacterized protein n=2 Tax=root RepID=A7A6I6_BIFAD
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:ETO97578.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_063_052G1_scaffold_613_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22749..23321)
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9Z8_9BIFI
GtrA-like protein {ECO:0000313|EMBL:ETO97585.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_063_052G1_scaffold_613_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23314..25743)
DNA (2430bp) protein (810aa)
Bgl4 Beta-glucosidase {ECO:0000313|EMBL:ADB10806.1}; EC=3.2.1.37 {ECO:0000313|EMBL:ADB10806.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
bgl4; beta-glucosidase (EC:3.2.1.37)
Bgl4 Beta-glucosidase n=2 Tax=Bifidobacterium dentium RepID=D2Q804_BIFDB
L3_063_052G1_scaffold_613_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26067..28958)
DNA (2892bp) protein (964aa)
Bgl5 Beta-glucosidase {ECO:0000313|EMBL:ADB10807.1}; EC=3.2.1.21 {ECO:0000313|EMBL:ADB10807.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
bgl5; beta-glucosidase (EC:3.2.1.21)
Bgl5 Beta-glucosidase n=2 Tax=Bifidobacterium dentium RepID=D2Q805_BIFDB
L3_063_052G1_scaffold_613_24
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29235..29870)
DNA (636bp) protein (212aa)
PAP2 family protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N7Q9_9BIFI
PAP2 family protein {ECO:0000313|EMBL:ETO97557.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
PAP2 family protein
Displaying 24 items

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