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L3_063_052G1_scaffold_624

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_624_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..204)
DNA (204bp) protein (68aa)
30S ribosomal protein S16 n=10 Tax=Veillonella RepID=D1BLK3_VEIPT
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
L3_063_052G1_scaffold_624_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(265..1617)
DNA (1353bp) protein (451aa)
Signal recognition particle protein n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLK2_VEIPT
signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_063_052G1_scaffold_624_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1607..1942)
DNA (336bp) protein (112aa)
UPF0122 protein HMPREF9323_1693 n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L245_9FIRM
UPF0122 protein HMPREF9323_1693 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
helix-turn-helix protein YlxM/p13 family protein
L3_063_052G1_scaffold_624_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2242..3567
DNA (1326bp) protein (442aa)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Veillonella RepID=D1YQS7_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFB85674.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
pyridine nucleotide-disulfide oxidoreductase dimerisation subunit
L3_063_052G1_scaffold_624_5
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3756..4283)
DNA (528bp) protein (176aa)
Putative membrane spanning protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KS78_9FIRM
Putative membrane spanning protein {ECO:0000313|EMBL:EFG24123.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
hypothetical protein
L3_063_052G1_scaffold_624_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4491..6665)
DNA (2175bp) protein (725aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EGL76630.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EGL76630.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Copper-exporting ATPase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L248_9FIRM
copper-translocating P-type ATPase
L3_063_052G1_scaffold_624_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7073..7726
DNA (654bp) protein (218aa)
YigZ family protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L249_9FIRM
YigZ family protein {ECO:0000313|EMBL:EGL76675.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
hypothetical protein
L3_063_052G1_scaffold_624_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7750..7935)
DNA (186bp) protein (62aa)
Uncharacterized protein n=3 Tax=Veillonella RepID=T0T765_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQC66902.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
hypothetical protein
L3_063_052G1_scaffold_624_9
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8131..9021
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=5 Tax=Veillonella RepID=T0T779_9FIRM
LysR family transcriptional regulator
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:EFG22317.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L3_063_052G1_scaffold_624_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(9210..10160)
DNA (951bp) protein (317aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Dihydroorotate dehydrogenase n=2 Tax=Veillonella RepID=D6KS83_9FIRM
dihydroorotate dehydrogenase
L3_063_052G1_scaffold_624_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10160..10927)
DNA (768bp) protein (256aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L253_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
L3_063_052G1_scaffold_624_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10933..14133)
DNA (3201bp) protein (1067aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UI84_9FIRM
carbamoyl-phosphate synthase large subunit
L3_063_052G1_scaffold_624_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14135..15202)
DNA (1068bp) protein (356aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Carbamoyl-phosphate synthase small chain n=2 Tax=Veillonella RepID=D1YQR8_9FIRM
carbamoyl-phosphate synthase small subunit
L3_063_052G1_scaffold_624_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15202..16341)
DNA (1140bp) protein (380aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Dihydroorotase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T771_9FIRM
dihydroorotase
Displaying 14 items

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