ggKbase home page

L3_063_052G1_scaffold_627

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_627_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

360..626
DNA (267bp) protein (89aa)
23S rRNA-methyltransferase RumA {ECO:0000313|EMBL:EDT16711.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDT16711.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RP24_CLOPF
L3_063_052G1_scaffold_627_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2148..2549
DNA (402bp) protein (134aa)
Rrf2 family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJA4_9FIRM
RrF2 family protein {ECO:0000313|EMBL:CEO36664.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
rrf2 family protein (putative transcriptional regulator)
L3_063_052G1_scaffold_627_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3344..3598
DNA (255bp) protein (85aa)
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CEO36672.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_063_052G1_scaffold_627_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3630..4358
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037DA6C1
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:CEP94828.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
response regulator
L3_063_052G1_scaffold_627_5
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4547..5914
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00035E422B
Signal transduction histidine kinase regulating citrate/malate metabolism {ECO:0000313|EMBL:CEO36675.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
GHKL domain protein
L3_063_052G1_scaffold_627_6
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6404..7132
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037DA6C1
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:CEP94828.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
response regulator
L3_063_052G1_scaffold_627_7
unknown

Not on your lists

comp(7637..7834)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_063_052G1_scaffold_627_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8440..8940
DNA (501bp) protein (167aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Clostridium perfringens RepID=B1R3T3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:KJU72115.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_063_052G1_scaffold_627_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8980..9609
DNA (630bp) protein (210aa)
Alternate signal-mediated exported protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTV5_CLOPF
alternate signal-mediated exported , family protein
Alternate signal-mediated exported, family protein {ECO:0000313|EMBL:AIY82661.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_063_052G1_scaffold_627_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9635..10267
DNA (633bp) protein (211aa)
Conserved domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVP0_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84230.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_063_052G1_scaffold_627_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10267..10881
DNA (615bp) protein (205aa)
Alternate signal-mediated exported , CPF_0494 family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VQC3_CLOBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84232.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_063_052G1_scaffold_627_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10894..12531
DNA (1638bp) protein (546aa)
von Willebrand factor type A domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTT9_CLOP1
von Willebrand factor type A domain protein
von Willebrand factor type A domain protein {ECO:0000313|EMBL:AIY82394.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_063_052G1_scaffold_627_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13231..15789
DNA (2559bp) protein (853aa)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUH2_CLOPF
Cell wall surface anchor family protein {ECO:0000313|EMBL:ABG85323.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
cell wall surface anchor family protein
Displaying 13 items

View Taxonomy