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L3_063_052G1_scaffold_657

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_052G1_scaffold_657_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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137..367
DNA (231bp) protein (77aa)
Uncharacterized protein n=190 Tax=Clostridium difficile RepID=C9XKQ6_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL24830.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_063_052G1_scaffold_657_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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380..529
DNA (150bp) protein (50aa)
Uncharacterized protein n=34 Tax=Clostridium difficile RepID=Q189G4_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ67451.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_063_052G1_scaffold_657_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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786..1223
DNA (438bp) protein (146aa)
Transcriptional regulator, LytR family n=151 Tax=Clostridium difficile RepID=Q189F8_CLOD6
transcriptional regulator
Transcriptional regulator, LytR family {ECO:0000313|EMBL:CCL32624.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_063_052G1_scaffold_657_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1480..2373
DNA (894bp) protein (298aa)
CAAX protease self-immunity family protein n=2 Tax=Clostridium difficile RepID=T4PWD5_CLODI
Putative membrane protein {ECO:0000313|EMBL:CCL24827.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative membrane protein
L3_063_052G1_scaffold_657_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2551..3375
DNA (825bp) protein (275aa)
MerR regulatory family protein n=74 Tax=Clostridium difficile RepID=T3IF89_CLODC
Transcriptional regulator, MerR family
MerR regulatory family protein {ECO:0000313|EMBL:EQE69376.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_063_052G1_scaffold_657_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3432..4082
DNA (651bp) protein (217aa)
TetR-family transcriptional regulator n=92 Tax=Clostridium difficile RepID=C9XKQ2_CLODC
TetR family transcriptional regulator
TetR-family transcriptional regulator {ECO:0000313|EMBL:CBE02402.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_063_052G1_scaffold_657_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4186..4362
DNA (177bp) protein (59aa)
Uncharacterized protein n=101 Tax=Clostridium difficile RepID=C9XKQ1_CLODC
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH65341.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS84373.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_063_052G1_scaffold_657_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4465..5004
DNA (540bp) protein (180aa)
Putative membrane protein n=1 Tax=Clostridium difficile DA00141 RepID=T3P0E5_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQI92532.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L3_063_052G1_scaffold_657_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5609..6361
DNA (753bp) protein (251aa)
ABC-type transport system, ATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=2 Tax=Clostridium difficile RepID=T4PVH6_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQG77473.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_063_052G1_scaffold_657_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6351..8462
DNA (2112bp) protein (704aa)
FtsX-like permease family protein n=25 Tax=Clostridium difficile RepID=T2TPY3_CLODI
ABC-type transport system, permease
ABC transporter permease {ECO:0000313|EMBL:CKH65390.1}; ABC-type transport system, permease {ECO:0000313|EMBL:CEJ97150.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_063_052G1_scaffold_657_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8845..9555
DNA (711bp) protein (237aa)
Response regulator n=2 Tax=Clostridium difficile RepID=T4PVB3_CLODI
two-component response regulator
Response regulator {ECO:0000313|EMBL:EQG78063.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_063_052G1_scaffold_657_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10080..11417
DNA (1338bp) protein (446aa)
Two-component sensor histidine kinase n=17 Tax=Clostridium difficile RepID=U4AAU8_CLODI
Two-component sensor histidine kinase {ECO:0000313|EMBL:CDS83921.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
two-component sensor histidine kinase
L3_063_052G1_scaffold_657_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11753..12322)
DNA (570bp) protein (190aa)
Uncharacterized protein n=17 Tax=Clostridium difficile RepID=T2WDN5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24817.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L3_063_052G1_scaffold_657_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12674..13687)
DNA (1014bp) protein (338aa)
BlaR1 peptidase M56 family protein n=43 Tax=Clostridium difficile RepID=T2TPY0_CLODI
Putative membrane-associated metalloprotease {ECO:0000313|EMBL:CDS83916.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
membrane-associated metalloprotease
L3_063_052G1_scaffold_657_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14299..15171)
DNA (873bp) protein (291aa)
Voltage gated chloride channel family protein n=5 Tax=Clostridium difficile RepID=T2W116_CLODI
Chloride ion channel protein {ECO:0000313|EMBL:CCL24815.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Group I intron
Displaying 15 items

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