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L3_063_250G2_scaffold_1269

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_250G2_scaffold_1269_1
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1..168
DNA (168bp) protein (56aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Phosphodiesterase family protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAM4_9ACTN
phosphodiesterase, MJ0936 family
L3_063_250G2_scaffold_1269_2
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

203..1075
DNA (873bp) protein (291aa)
MazG family protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA15_9ACTN
MazG family protein {ECO:0000313|EMBL:EEA90870.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
MazG family protein
L3_063_250G2_scaffold_1269_3
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1041..1493)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA16_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90871.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_250G2_scaffold_1269_4
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1522..2016)
DNA (495bp) protein (165aa)
TIGR03987 family protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAM1_9ACTN
TIGR03987 family protein {ECO:0000313|EMBL:EEP44155.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_250G2_scaffold_1269_5
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2194..2763
DNA (570bp) protein (190aa)
Transcriptional regulator, TetR family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAL9_9ACTN
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEP44153.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
TetR family transcriptional regulator
L3_063_250G2_scaffold_1269_6
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3260..3925
DNA (666bp) protein (222aa)
Septum formation initiator n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA18_9ACTN
Septum formation initiator {ECO:0000313|EMBL:EEA90873.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_250G2_scaffold_1269_7
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3934..4917
DNA (984bp) protein (328aa)
Ppx/GppA phosphatase family protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA19_9ACTN
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:EEA90874.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Ppx/GppA phosphatase
L3_063_250G2_scaffold_1269_8
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5989..7047)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC07_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43706.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_063_250G2_scaffold_1269_9
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7273..8253
DNA (981bp) protein (327aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA21_9ACTN
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:EEA90876.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_250G2_scaffold_1269_10
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8388..8807
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA22_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90877.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L3_063_250G2_scaffold_1269_11
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8976..10040)
DNA (1065bp) protein (355aa)
Acyltransferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC03_9ACTN
Acyltransferase {ECO:0000313|EMBL:EEP43702.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
acetyltransferase, fucose-4-O-acetylase
L3_063_250G2_scaffold_1269_12
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10191..10979
DNA (789bp) protein (263aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA24_9ACTN
L3_063_250G2_scaffold_1269_13
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10976..11143)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA25_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90880.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_250G2_scaffold_1269_14
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11316..12608
DNA (1293bp) protein (431aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA26_9ACTN
L3_063_250G2_scaffold_1269_15
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12732..13676
DNA (945bp) protein (315aa)
Cof-like hydrolase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C6F9_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:EEG72294.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
HAD-superfamily hydrolase, subfamily IIB
L3_063_250G2_scaffold_1269_16
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13802..14128
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9LAY2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EOS50851.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
transposase
L3_063_250G2_scaffold_1269_17
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14259..15491
DNA (1233bp) protein (411aa)
Integrase core domain protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6Z2C5_9ACTN
Integrase core domain protein {ECO:0000313|EMBL:CDD40360.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
transposase
L3_063_250G2_scaffold_1269_18
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15637..16266
DNA (630bp) protein (210aa)
IstB-like ATP-binding protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GEM9_9ACTN
IstB-like ATP-binding protein {ECO:0000313|EMBL:EEA89266.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
DNA replication protein
L3_063_250G2_scaffold_1269_19
unknown

Not on your lists

comp(16553..16684)
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 19 items

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