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L3_063_250G2_scaffold_1627

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_250G2_scaffold_1627_1
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1..930
DNA (930bp) protein (310aa)
NAD+ synthase {ECO:0000313|EMBL:EEA90366.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EEA90366.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
NAD+ synthase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBH5_9ACTN
NAD+ synthetase
L3_063_250G2_scaffold_1627_2
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1191..2675
DNA (1485bp) protein (495aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WFP9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX68646.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
PTS system fructose subfamily transporter subunit IIC
L3_063_250G2_scaffold_1627_3
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2782..3714
DNA (933bp) protein (311aa)
1-phosphofructokinase {ECO:0000313|EMBL:EEP44585.1}; EC=2.7.1.56 {ECO:0000313|EMBL:EEP44585.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
1-phosphofructokinase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F997_9ACTN
1-phosphofructokinase
L3_063_250G2_scaffold_1627_4
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3953..5182
DNA (1230bp) protein (410aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEP44584.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEP44584.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Aminotransferase, class I/II n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F996_9ACTN
Aspartate/tyrosine/aromatic aminotransferase
L3_063_250G2_scaffold_1627_5
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5331..6281
DNA (951bp) protein (317aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBH8_9ACTN
L3_063_250G2_scaffold_1627_6
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6460..7689
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F994_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44582.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
putative hydrolase or acyl transferase
L3_063_250G2_scaffold_1627_7
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8116..9123
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F991_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44579.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_250G2_scaffold_1627_8
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9237..9794)
DNA (558bp) protein (186aa)
PTS system, glucose subfamily, IIA component n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F990_9ACTN
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EEP44578.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
PTS system glucose subfamily transporter subunit IIA
L3_063_250G2_scaffold_1627_9
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9944..10954)
DNA (1011bp) protein (337aa)
Peptidase family T4 n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F988_9ACTN
Peptidase family T4 {ECO:0000313|EMBL:EEP44576.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
peptidase S58 DmpA
L3_063_250G2_scaffold_1627_10
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11126..11638)
DNA (513bp) protein (171aa)
Maf-like protein maf n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBI8_9ACTN
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
maf protein
L3_063_250G2_scaffold_1627_11
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11674..12219)
DNA (546bp) protein (182aa)
DJ-1 family protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBI9_9ACTN
DJ-1 family protein {ECO:0000313|EMBL:EEA90342.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein
L3_063_250G2_scaffold_1627_12
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12315..12674)
DNA (360bp) protein (120aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EEA90343.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEA90343.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBJ0_9ACTN
L3_063_250G2_scaffold_1627_13
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12671..13465)
DNA (795bp) protein (265aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EEP44573.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEP44573.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F985_9ACTN
L3_063_250G2_scaffold_1627_14
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14382..14579
DNA (198bp) protein (66aa)
Radical SAM domain protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBJ1_9ACTN
Radical SAM domain protein {ECO:0000313|EMBL:EEA90344.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
radical SAM domain protein
Displaying 14 items

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