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L3_063_250G2_scaffold_757

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_250G2_scaffold_757_1
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3..749
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9H9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA91069.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_250G2_scaffold_757_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(867..1295)
DNA (429bp) protein (143aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9M9_9ACTN
FKBP-type peptidylprolyl isomerase
L3_063_250G2_scaffold_757_3
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1399..2169)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WFE5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX71893.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
Predicted ATPase
L3_063_250G2_scaffold_757_4
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2284..3567)
DNA (1284bp) protein (428aa)
Putative permease n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9H6_9ACTN
Putative permease {ECO:0000313|EMBL:EEA91066.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
pyrP; NCS2 family nucleobase:cation symporter-2
L3_063_250G2_scaffold_757_5
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3840..4562
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9H5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA91065.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_250G2_scaffold_757_6
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4671..4808)
DNA (138bp) protein (46aa)
Rubredoxin n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N4_9ACTN
Rubredoxin {ECO:0000313|EMBL:EEP44412.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
rubredoxin-type Fe(Cys)4 protein
L3_063_250G2_scaffold_757_7
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5036..5680)
DNA (645bp) protein (215aa)
Putative high molecular weight rubredoxin n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N5_9ACTN
Putative high molecular weight rubredoxin {ECO:0000313|EMBL:EEP44413.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
flavin reductase domain-containing FMN-binding protein
L3_063_250G2_scaffold_757_8
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5765..6253)
DNA (489bp) protein (163aa)
SsrA-binding protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N6_9ACTN
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
SsrA-binding protein
L3_063_250G2_scaffold_757_9
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6256..7113)
DNA (858bp) protein (286aa)
Tetratricopeptide repeat protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N7_9ACTN
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEP44415.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_250G2_scaffold_757_10
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7233..9431)
DNA (2199bp) protein (733aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Ribonuclease R n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9G5_9ACTN
VacB; exoribonuclease
L3_063_250G2_scaffold_757_11
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9769..10716)
DNA (948bp) protein (316aa)
Cell division protein FtsX n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9G4_9ACTN
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
cell division protein FtsX
L3_063_250G2_scaffold_757_12
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10703..11866)
DNA (1164bp) protein (388aa)
Cell division ATP-binding protein FtsE n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9P1_9ACTN
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EEP44419.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
cell division ATP-binding protein FtsE
L3_063_250G2_scaffold_757_13
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11976..12863)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9G1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA91092.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_250G2_scaffold_757_14
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12871..14001)
DNA (1131bp) protein (377aa)
Peptide chain release factor 2 n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9F9_9ACTN
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
peptide chain release factor 2 (bRF-2)
L3_063_250G2_scaffold_757_15
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14001..16976)
DNA (2976bp) protein (992aa)
Protein translocase subunit SecA n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9F8_9ACTN
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
preprotein translocase subunit SecA
L3_063_250G2_scaffold_757_16
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(17314..17754)
DNA (441bp) protein (147aa)
50S ribosomal protein L31 n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9P5_9ACTN
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
50S ribosomal protein L31
L3_063_250G2_scaffold_757_17
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17936..19384)
DNA (1449bp) protein (483aa)
Citrate (Si)-synthase {ECO:0000313|EMBL:EEA91086.1}; EC=2.3.3.1 {ECO:0000313|EMBL:EEA91086.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
citrate (Si)-synthase (EC:2.3.3.1)
Citrate (Si)-synthase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9F5_9ACTN
L3_063_250G2_scaffold_757_18
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19501..19788)
DNA (288bp) protein (96aa)
UPF0237 protein COLSTE_00694 n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9F4_9ACTN
UPF0237 protein COLSTE_00694 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
ACT domain-containing protein
L3_063_250G2_scaffold_757_19
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20015..20818)
DNA (804bp) protein (268aa)
Cof-like hydrolase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9F2_9ACTN
Cof-like hydrolase {ECO:0000313|EMBL:EEA91083.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
HAD-superfamily hydrolase
L3_063_250G2_scaffold_757_20
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20994..22982)
DNA (1989bp) protein (663aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9P9_9ACTN
L3_063_250G2_scaffold_757_21
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23194..24432)
DNA (1239bp) protein (413aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9E7_9ACTN
L3_063_250G2_scaffold_757_22
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24522..26648)
DNA (2127bp) protein (709aa)
Peptidase, U32 family {ECO:0000313|EMBL:EEP44429.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEP44429.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Peptidase, U32 family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9Q1_9ACTN
peptidase U32
L3_063_250G2_scaffold_757_23
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26800..27675
DNA (876bp) protein (292aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9E4_9ACTN
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EEA91127.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Displaying 23 items

View Taxonomy