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L3_063_250G2_scaffold_766

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_250G2_scaffold_766_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1..501)
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Endoribonuclease YbeY n=2 Tax=Collinsella RepID=R5ZGR4_9ACTN
hypothetical protein
L3_063_250G2_scaffold_766_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(498..1484)
DNA (987bp) protein (329aa)
PhoH family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC67_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73010.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PhoH; phosphate starvation-inducible protein PhoH
L3_063_250G2_scaffold_766_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1465..2757)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAA0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73011.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
MiaB family RNA modification protein
L3_063_250G2_scaffold_766_4
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2767..3924)
DNA (1158bp) protein (386aa)
Chaperone protein DnaJ n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8A5_9ACTN
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
heat shock protein DnaJ domain-containing protein
L3_063_250G2_scaffold_766_5
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4130..5251)
DNA (1122bp) protein (374aa)
DnaJ domain protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCF8_9ACTN
DnaJ domain protein {ECO:0000313|EMBL:EEA89989.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
heat shock protein DnaJ domain-containing protein
L3_063_250G2_scaffold_766_6
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5447..5929)
DNA (483bp) protein (161aa)
dCMP deaminase (EC:3.5.4.12)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCF9_9ACTN
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EEA89990.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L3_063_250G2_scaffold_766_7
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6326..7558)
DNA (1233bp) protein (411aa)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EEP45001.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EEP45001.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8A1_9ACTN
oxygen-independent coproporphyrinogen III oxidase
L3_063_250G2_scaffold_766_8
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7561..8688)
DNA (1128bp) protein (376aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
tRNA-dihydrouridine synthase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8A0_9ACTN
tRNA-U20-dihydrouridine synthase
L3_063_250G2_scaffold_766_9
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8875..10692)
DNA (1818bp) protein (606aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Elongation factor 4 n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCG4_9ACTN
GTP-binding protein LepA
L3_063_250G2_scaffold_766_10
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11011..12645)
DNA (1635bp) protein (545aa)
DNA repair protein RecN n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCG5_9ACTN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
DNA replication and repair protein RecN
L3_063_250G2_scaffold_766_11
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12635..13495)
DNA (861bp) protein (287aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCG6_9ACTN
ATP-NAD/AcoX kinase
L3_063_250G2_scaffold_766_12
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13492..14229)
DNA (738bp) protein (246aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:EEA89998.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEA89998.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCG7_9ACTN
hemolysin A
L3_063_250G2_scaffold_766_13
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14320..14631)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCG8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA89999.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Exonuclease VII small subunit
L3_063_250G2_scaffold_766_14
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14635..15285)
DNA (651bp) protein (217aa)
N utilization substance protein B homolog n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCG9_9ACTN
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
NusB antitermination factor
L3_063_250G2_scaffold_766_15
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15289..15648)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCH0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90001.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_250G2_scaffold_766_16
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15689..16252)
DNA (564bp) protein (188aa)
Elongation factor P n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCH1_9ACTN
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
translation elongation factor P
L3_063_250G2_scaffold_766_17
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16306..17436)
DNA (1131bp) protein (377aa)
Creatinase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCH6_9ACTN
Creatinase {ECO:0000313|EMBL:EEA90007.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
peptidase M24
L3_063_250G2_scaffold_766_18
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17525..18616)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCH7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90008.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
3-dehydroquinate synthase
L3_063_250G2_scaffold_766_19
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18613..19146)
DNA (534bp) protein (178aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCH8_9ACTN
L3_063_250G2_scaffold_766_20
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19153..19650)
DNA (498bp) protein (166aa)
HAD phosphatase, family IIIA {ECO:0000313|EMBL:EEA90010.1}; EC=3.1.3.- {ECO:0000313|EMBL:EEA90010.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
HAD phosphatase, family IIIA n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCH9_9ACTN
HAD superfamily phosphatase
L3_063_250G2_scaffold_766_21
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19654..20919)
DNA (1266bp) protein (422aa)
YceG family protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCI0_9ACTN
YceG family protein {ECO:0000313|EMBL:EEA90011.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
aminodeoxychorismate lyase
L3_063_250G2_scaffold_766_22
unknown

Not on your lists

21122..21541
DNA (420bp) protein (140aa)

This feature has no annotations

L3_063_250G2_scaffold_766_23
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(21356..24010)
DNA (2655bp) protein (885aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCI2_9ACTN
L3_063_250G2_scaffold_766_24
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24076..25443)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCI3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90014.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_250G2_scaffold_766_25
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25465..26250)
DNA (786bp) protein (262aa)
RNA polymerase sigma factor n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCI4_9ACTN
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
RNA polymerase sigma-37 subunit RpsB/SigB
L3_063_250G2_scaffold_766_26
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26240..26626)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCI5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90016.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_250G2_scaffold_766_27
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26619..27185)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCI6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90017.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_250G2_scaffold_766_28
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27545..28870)
DNA (1326bp) protein (442aa)
ATPase, AAA family n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCI7_9ACTN
ATPase, AAA family {ECO:0000313|EMBL:EEA90018.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
recombination protein MgsA
L3_063_250G2_scaffold_766_29
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28944..30242)
DNA (1299bp) protein (433aa)
Putative dGTPase {ECO:0000313|EMBL:EEA90019.1}; EC=3.1.5.1 {ECO:0000313|EMBL:EEA90019.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Putative dGTPase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCI8_9ACTN
metal-dependent phosphohydrolase HD sub domain-containing protein
L3_063_250G2_scaffold_766_30
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30329..30790)
DNA (462bp) protein (154aa)
Peptidase, A24 family n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCI9_9ACTN
Peptidase, A24 family {ECO:0000313|EMBL:EEA90020.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
peptidase A24
Displaying items 1-30 of 39 in total

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