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L3_063_368G1_scaffold_2009

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_2009_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..2475)
DNA (2475bp) protein (825aa)
TonB-dependent receptor n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WAJ6_BACOV
TonB-dependent receptor {ECO:0000313|EMBL:EFF54479.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_2009_2
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2615..3151)
DNA (537bp) protein (179aa)
Secretin and TonB N-terminal domain protein short domain protein n=3 Tax=Bacteroides RepID=D4WAJ5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:CDB57223.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_063_368G1_scaffold_2009_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3296..4282)
DNA (987bp) protein (329aa)
Sigma factor regulatory protein, FecR/PupR family n=4 Tax=Bacteroides RepID=D4WAJ4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68259.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
anti-sigma factor
L3_063_368G1_scaffold_2009_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4339..4890)
DNA (552bp) protein (184aa)
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Bacteroides RepID=I8YYM9_BACOV
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY68260.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
RNA polymerase ECF-type sigma factor
L3_063_368G1_scaffold_2009_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5133..6443)
DNA (1311bp) protein (437aa)
L-fucose:H+ symporter permease n=6 Tax=Bacteroides RepID=A7M173_BACOV
H+ symporter permease {ECO:0000313|EMBL:KDS13005.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L-fucose:H+ symporter permease
L3_063_368G1_scaffold_2009_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6463..6855)
DNA (393bp) protein (131aa)
hypothetical protein (EC:5.1.3.-)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7M172_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF54474.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_063_368G1_scaffold_2009_7
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6862..8292)
DNA (1431bp) protein (477aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.5 2.7.1.51)
Carbohydrate kinase, FGGY family protein n=2 Tax=Bacteroides RepID=D4WAJ0_BACOV
Carbohydrate kinase FGGY family protein {ECO:0000313|EMBL:CDB58302.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_063_368G1_scaffold_2009_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8310..8948)
DNA (639bp) protein (213aa)
Class II Aldolase and Adducin N-terminal domain protein n=4 Tax=Bacteroides RepID=D4WAI9_BACOV
Class II Aldolase and Adducin N-terminal domain protein {ECO:0000313|EMBL:EFF54472.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
L3_063_368G1_scaffold_2009_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9078..10853)
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=4 Tax=Bacteroides RepID=C3QYC0_9BACE
L3_063_368G1_scaffold_2009_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10923..11918)
DNA (996bp) protein (332aa)
Transcriptional regulator, GntR family n=2 Tax=Bacteroides ovatus RepID=D4WAI7_BACOV
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFF54470.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
FucR
L3_063_368G1_scaffold_2009_11
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12096..12575)
DNA (480bp) protein (160aa)
30S ribosomal protein S16 n=12 Tax=Bacteroides RepID=D6D4E2_9BACE
SSU ribosomal protein S16P
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Displaying 11 items

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