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L3_063_368G1_scaffold_2621

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_2621_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..1078)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6J6V5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN04021.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
HD superfamily phosphohydrolases
L3_063_368G1_scaffold_2621_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1109..1933)
DNA (825bp) protein (275aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=5 Tax=Bacteroides RepID=C3QSG8_9BACE
L3_063_368G1_scaffold_2621_3
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2010..3122)
DNA (1113bp) protein (371aa)
Peptide chain release factor 1 n=5 Tax=Bacteroides RepID=D7K8V5_9BACE
bacterial peptide chain release factor 1 (bRF-1)
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_063_368G1_scaffold_2621_4
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3126..4292)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R6JB04_9BACE
Putative phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000313|EMBL:EFI37192.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
phosphoribosylformylglycinamidine cyclo-ligase
L3_063_368G1_scaffold_2621_5
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4421..6586)
DNA (2166bp) protein (722aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3QSH1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO54905.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
Appr-1-p processing enzyme domain-containing protein
L3_063_368G1_scaffold_2621_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6543..7073)
DNA (531bp) protein (177aa)
Uncharacterized protein n=3 Tax=Bacteroides ovatus RepID=A7M4L9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY63537.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_063_368G1_scaffold_2621_7
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7627..8208)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6J6V1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB58393.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_063_368G1_scaffold_2621_8
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8257..9189)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6K838_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB58392.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Beta-propeller domains of methanol dehydrogenase type
L3_063_368G1_scaffold_2621_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9262..10176)
DNA (915bp) protein (305aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7M4M3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY63534.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Hydrolases of the alpha/beta superfamily
L3_063_368G1_scaffold_2621_10
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10231..10977)
DNA (747bp) protein (249aa)
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=8 Tax=Bacteroides RepID=D7K8W2_9BACE
Putative shikimate dehydrogenase {ECO:0000313|EMBL:EEO54909.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
L3_063_368G1_scaffold_2621_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10984..12012)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R6JI88_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF54079.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_2621_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12030..12767)
DNA (738bp) protein (246aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
demethylmenaquinone methyltransferase (EC:2.1.1.-)
Demethylmenaquinone methyltransferase n=4 Tax=Bacteroides RepID=C3QSH7_9BACE
L3_063_368G1_scaffold_2621_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12930..13772)
DNA (843bp) protein (281aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=8 Tax=Bacteroides RepID=A7M4M7_BACOV
L3_063_368G1_scaffold_2621_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13766..14791)
DNA (1026bp) protein (342aa)
PhoH family protein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6UYK7_9BACE
PhoH family protein {ECO:0000313|EMBL:EFF54082.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
phosphate starvation-inducible protein, PhoH
L3_063_368G1_scaffold_2621_15
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14893..15570)
DNA (678bp) protein (226aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7M4M9_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFI37203.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_063_368G1_scaffold_2621_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15917..17152
DNA (1236bp) protein (412aa)
Site-specific recombinase, phage integrase family n=5 Tax=Bacteroidales RepID=E1KN21_9BACT
Phage integrase family protein {ECO:0000313|EMBL:EXZ06538.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
integrase
L3_063_368G1_scaffold_2621_17
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17165..17527
DNA (363bp) protein (121aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C6ITW5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES65762.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
RhuM protein
L3_063_368G1_scaffold_2621_18
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17630..19750)
DNA (2121bp) protein (707aa)
Helicase C-terminal domain protein n=5 Tax=Bacteroidales RepID=E1KN19_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EES65763.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_063_368G1_scaffold_2621_19
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19737..20678)
DNA (942bp) protein (314aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=C6ITW7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA56640.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
L3_063_368G1_scaffold_2621_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20731..20934)
DNA (204bp) protein (68aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=C6ITW8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY76712.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
hypothetical protein
L3_063_368G1_scaffold_2621_21
Prevotella bivia, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21125..21430)
DNA (306bp) protein (102aa)
Excisionase family DNA binding domain-containing protein n=5 Tax=Bacteroidales RepID=C6ITW9_9BACE
DNA-binding protein {ECO:0000313|EMBL:KGF44847.1}; TaxID=1401068 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella bivia DNF00320.;"
DNA binding domain-containing protein
L3_063_368G1_scaffold_2621_22
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22042..22398
DNA (357bp) protein (119aa)
DNA-binding protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003779297
DNA-binding protein
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFA20349.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
L3_063_368G1_scaffold_2621_23
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22269..22637)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9H5M8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY54869.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
L3_063_368G1_scaffold_2621_24
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22664..24232
DNA (1569bp) protein (523aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C6ITX3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES65770.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_063_368G1_scaffold_2621_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24294..24491
DNA (198bp) protein (66aa)
DNA topoisomerase {ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|SAAS:SAAS00046608};; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
DNA topoisomerase III n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EMK5_9BACE
DNA topoisomerase I
Displaying 25 items

View Taxonomy