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L3_063_368G1_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 187 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_22_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(42..488)
DNA (447bp) protein (149aa)
Transcriptional regulators n=2 Tax=Faecalibacterium prausnitzii RepID=D4K893_9FIRM
Transcriptional regulators
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDP23092.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_063_368G1_scaffold_22_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(639..890)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05660.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_063_368G1_scaffold_22_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(832..1917)
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBB8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02131.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_063_368G1_scaffold_22_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2332..3003)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ69_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99318.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3090..3830)
DNA (741bp) protein (247aa)
Acetyltransferase (GNAT) family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ68_9FIRM
Acetyltransferase (GNAT) family.
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CBK99317.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3906..4046)
DNA (141bp) protein (47aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8G8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP22364.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_063_368G1_scaffold_22_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4072..4968)
DNA (897bp) protein (299aa)
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIE2_9FIRM
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein {ECO:0000313|EMBL:EFQ07048.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Lactate dehydrogenase and related dehydrogenases
L3_063_368G1_scaffold_22_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4984..5784)
DNA (801bp) protein (267aa)
Predicted dinucleotide-utilizing enzyme (EC:1.4.1.21)
Predicted dinucleotide-utilizing enzyme {ECO:0000313|EMBL:CBL02939.1}; EC=1.4.1.21 {ECO:0000313|EMBL:CBL02939.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Predicted dinucleotide-utilizing enzyme n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K5T0_9FIRM
L3_063_368G1_scaffold_22_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6162..8225
DNA (2064bp) protein (688aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ66_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99315.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8300..9157
DNA (858bp) protein (286aa)
Predicted metal-dependent phosphoesterases (PHP family) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ65_9FIRM
Predicted metal-dependent phosphoesterases (PHP family)
Predicted metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:CBK99314.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9256..9516
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ64_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99313.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9897..10277
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ63_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99312.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10274..11188
DNA (915bp) protein (305aa)
DnaD and phage-associated domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ62_9FIRM
DnaD and phage-associated domain
DnaD and phage-associated domain {ECO:0000313|EMBL:CBK99311.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11210..12190
DNA (981bp) protein (327aa)
DNA replication protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ61_9FIRM
DNA replication protein
DNA replication protein {ECO:0000313|EMBL:CBK99310.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12240..13172
DNA (933bp) protein (311aa)
Sugar kinases, ribokinase family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ60_9FIRM
Sugar kinases, ribokinase family
Sugar kinases, ribokinase family {ECO:0000313|EMBL:CBK99309.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13340..14710
DNA (1371bp) protein (457aa)
Transporter n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ59_9FIRM
Na+-dependent transporters of the SNF family
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14763..15326)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ58_9FIRM
conserved hypothetical protein, DprA/Smf-related, family 2
Uncharacterized protein {ECO:0000313|EMBL:CBK99307.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15314..16273)
DNA (960bp) protein (320aa)
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776, ECO:0000313|EMBL:CBK99306.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
2-dehydropantoate 2-reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ57_9FIRM
L3_063_368G1_scaffold_22_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17022..19799)
DNA (2778bp) protein (926aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97703.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
LPXTG-motif cell wall anchor domain-containing protein
L3_063_368G1_scaffold_22_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20097..20441)
DNA (345bp) protein (115aa)
Cupin domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ55_9FIRM
Cupin domain.
Cupin domain {ECO:0000313|EMBL:CBK99304.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20606..21811)
DNA (1206bp) protein (402aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3C8_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_063_368G1_scaffold_22_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21983..24109)
DNA (2127bp) protein (709aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Elongation factor G n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SFM2_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_063_368G1_scaffold_22_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24134..24604)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=3 Tax=Faecalibacterium prausnitzii RepID=D4JZ51_9FIRM
SSU ribosomal protein S7P
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_063_368G1_scaffold_22_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24768..25196)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ50_9FIRM
SSU ribosomal protein S12P
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25600..29175)
DNA (3576bp) protein (1192aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:CBK99298.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ49_9FIRM
L3_063_368G1_scaffold_22_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29309..33136)
DNA (3828bp) protein (1276aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBK99297.1}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBK99297.1};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ48_9FIRM
L3_063_368G1_scaffold_22_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33526..34605)
DNA (1080bp) protein (360aa)
RNA polymerase sigma factor SigA n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ46_9FIRM
RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34642..36420)
DNA (1779bp) protein (593aa)
DNA primase, catalytic core (EC:2.7.7.-)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
DNA primase n=2 Tax=root RepID=D4JZ45_9FIRM
L3_063_368G1_scaffold_22_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36442..37440)
DNA (999bp) protein (333aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase, putative n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ44_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_063_368G1_scaffold_22_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37628..38248)
DNA (621bp) protein (207aa)
Putative YigZ family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3D9_9FIRM
Putative YigZ family protein {ECO:0000313|EMBL:EEU97619.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
Displaying items 1-30 of 187 in total

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